Detailed information NTG0846855

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: VZG47_RS10790
• Genome accession: NZ_CP144288
• Coordinates: 2077739..2079178 (-)
• Length: 479 a.a.
• NCBI ID: WP_338429774.1
• Uniprot ID: -
• Organism: Synechococcus elongatus IITB5
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2072739..2084178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZG47_RS10765 (VZG47_10760)	mreD	2074131..2074814 (-)	684	WP_228383154.1	rod shape-determining protein MreD	-
VZG47_RS10770 (VZG47_10765)	mreC	2074775..2075524 (-)	750	WP_208678351.1	rod shape-determining protein MreC	-
VZG47_RS10775 (VZG47_10770)	-	2075549..2076550 (-)	1002	WP_275937699.1	rod shape-determining protein	-
VZG47_RS10780 (VZG47_10775)	ssb	2076779..2077141 (+)	363	WP_208675098.1	single-stranded DNA-binding protein	Machinery gene
VZG47_RS10785 (VZG47_10780)	-	2077268..2077699 (+)	432	WP_338429773.1	GNAT family N-acetyltransferase	-
VZG47_RS10790 (VZG47_10785)	comA	2077739..2079178 (-)	1440	WP_338429774.1	phospholipase D-like domain-containing protein	Machinery gene
VZG47_RS10795 (VZG47_10790)	-	2079485..2082388 (+)	2904	WP_338429775.1	DNA methyltransferase	-
VZG47_RS10800 (VZG47_10795)	-	2082473..2083561 (+)	1089	WP_338429776.1	potassium channel protein	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 52660.10 Da
• Isoelectric Point: 5.6977

>NTDB_id=846855 VZG47_RS10790 WP_338429774.1 2077739..2079178(-) (comA) [Synechococcus elongatus IITB5]
MKPGVIALLLGLLTACQAPLAQILPVAGGGSTRWDANAPLQVAFNHNPEQRFTDGLGRDREGEDLEGRLLASLEQATTSI
DVAVQEIQLPRLATVLAQKHQAGIPVRVILENQYRQPWSQRLSAPMSDRDRQRLENYRQLADRNGDGQLSPAEIATGDAV
VILERAGVPILDDTADGSKGSGLMHHKFAIIDRQWVVTGSANWTASDFFGDPGRPASRGNANHLLWFRSPAIAATFQTEF
DLMWGDGPGNLPDSLFGRAKPPRSPQSVRVGQTRVLVQFSPSSLRLPWEQSTNGTIARYLTQAQQQVDLALFVFSEQAIA
DILEARSQQGTQIRLLIDPGFAYRPYSELLDAFGLSLADRDCRVEPNNRPWATPLRTAGVPRLAPGDTLHHKFAVIDRQR
VLTGSHNWSAAANENNDETFLVIEDTTLAAQFSAEFERLYASAFLGIPPALQRRVNEANRRCGSRLETAPSRDSAEPED

Nucleotide

• Length: 1440 bp

>NTDB_id=846855 VZG47_RS10790 WP_338429774.1 2077739..2079178(-) (comA) [Synechococcus elongatus IITB5]
ATGAAGCCTGGAGTGATCGCCCTGCTGCTAGGGCTACTAACCGCCTGCCAAGCCCCGCTCGCGCAGATTCTCCCCGTTGC
TGGCGGTGGCTCCACTCGTTGGGATGCCAATGCACCCCTCCAGGTTGCGTTTAATCACAATCCAGAACAGCGATTTACCG
ATGGCTTAGGGCGCGATCGTGAGGGAGAAGATCTGGAAGGACGACTGCTTGCCAGCTTGGAACAGGCGACAACCTCAATC
GATGTCGCGGTTCAGGAAATCCAGCTTCCCCGACTGGCAACAGTCTTGGCCCAAAAACACCAGGCGGGCATCCCGGTTCG
CGTCATCTTGGAAAACCAATATCGCCAGCCCTGGAGTCAGCGCCTCTCTGCCCCAATGAGCGATCGCGATCGGCAACGGC
TGGAGAACTACCGGCAACTGGCCGATCGCAATGGAGATGGACAGCTCAGCCCAGCTGAAATTGCCACGGGAGATGCTGTG
GTCATCCTTGAGCGTGCTGGGGTGCCGATCCTGGATGACACCGCTGATGGCAGCAAAGGCAGCGGCCTCATGCACCACAA
GTTTGCGATCATCGATCGCCAATGGGTGGTCACCGGTTCAGCCAACTGGACCGCCAGCGATTTCTTTGGTGATCCGGGTC
GACCGGCCAGCCGAGGCAATGCCAATCATCTGCTTTGGTTCCGAAGCCCTGCGATCGCCGCTACCTTCCAAACAGAATTT
GACCTCATGTGGGGAGATGGCCCCGGTAACTTGCCTGACAGTCTGTTTGGTCGGGCGAAGCCGCCGCGATCGCCGCAATC
AGTGCGCGTAGGTCAGACCCGTGTCCTGGTGCAGTTTTCGCCCTCCAGCCTGCGATTGCCTTGGGAGCAGAGCACCAATG
GCACGATCGCTCGTTACCTCACGCAAGCTCAACAGCAGGTCGATCTGGCGCTCTTTGTTTTTTCCGAGCAGGCGATCGCG
GATATTTTGGAAGCGCGATCGCAGCAAGGCACCCAGATTCGCTTGCTGATTGACCCTGGCTTTGCCTATCGGCCCTACAG
CGAACTCTTGGATGCGTTTGGCCTCAGCCTTGCCGATCGCGACTGTCGTGTTGAGCCTAACAATCGCCCTTGGGCAACAC
CACTGAGGACTGCCGGAGTGCCGCGGTTGGCGCCGGGCGATACGTTGCATCACAAGTTCGCCGTGATCGATCGCCAGCGT
GTGCTGACCGGATCCCACAACTGGAGTGCAGCGGCAAACGAAAACAACGATGAAACCTTTCTGGTCATTGAGGATACAAC
CCTGGCAGCTCAATTCAGTGCTGAATTTGAGCGACTCTATGCCAGTGCGTTCTTAGGAATCCCGCCAGCTCTACAACGGC
GAGTCAACGAGGCCAATCGCCGCTGTGGGAGTCGATTGGAAACAGCACCCAGCCGAGATTCCGCAGAGCCGGAAGACTAA

Domains

Predicted by InterProScan.

• PLD-like domain (PLDc_2) (298-439)

• PLD-like domain (PLDc_2) (70-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	45.86	98.33	0.451