Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   QSU95_RS22300 Genome accession   NZ_CP128205
Coordinates   1450134..1451231 (+) Length   365 a.a.
NCBI ID   WP_004726763.1    Uniprot ID   A0A0Q2SGB9
Organism   Vibrio furnissii strain VFBJ05     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1410583..1449714 1450134..1451231 flank 420


Gene organization within MGE regions


Location: 1410583..1451231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSU95_RS22020 (QSU95_22020) - 1410583..1412469 (-) 1887 WP_286212836.1 hypothetical protein -
  QSU95_RS23605 - 1412498..1412605 (-) 108 WP_222784167.1 GpE family phage tail protein -
  QSU95_RS22025 (QSU95_22025) - 1412641..1412928 (-) 288 WP_075990071.1 phage tail assembly protein -
  QSU95_RS22030 (QSU95_22030) gpM 1412912..1413619 (-) 708 WP_286213692.1 phage terminase small subunit -
  QSU95_RS22035 (QSU95_22035) - 1413630..1413995 (-) 366 WP_061055511.1 phage tail tube protein -
  QSU95_RS22040 (QSU95_22040) - 1413999..1415132 (-) 1134 WP_286212838.1 phage tail sheath subtilisin-like domain-containing protein -
  QSU95_RS22045 (QSU95_22045) - 1415129..1415311 (-) 183 WP_020432118.1 DUF2635 domain-containing protein -
  QSU95_RS22050 (QSU95_22050) - 1415312..1415851 (-) 540 WP_286212842.1 phage virion morphogenesis protein -
  QSU95_RS22055 (QSU95_22055) - 1415848..1416312 (-) 465 WP_286212843.1 phage tail protein -
  QSU95_RS22060 (QSU95_22060) - 1416312..1416761 (-) 450 WP_222818782.1 head completion/stabilization protein -
  QSU95_RS22065 (QSU95_22065) - 1416870..1417907 (-) 1038 WP_286212845.1 phage major capsid protein, P2 family -
  QSU95_RS22070 (QSU95_22070) - 1417950..1418777 (-) 828 WP_172562415.1 GPO family capsid scaffolding protein -
  QSU95_RS22075 (QSU95_22075) - 1418912..1420672 (+) 1761 WP_172562414.1 terminase family protein -
  QSU95_RS22080 (QSU95_22080) - 1420683..1421639 (+) 957 WP_154179811.1 phage portal protein -
  QSU95_RS22085 (QSU95_22085) - 1421661..1422254 (-) 594 WP_158108525.1 Fic family protein -
  QSU95_RS22090 (QSU95_22090) - 1422244..1422402 (-) 159 WP_193386120.1 hypothetical protein -
  QSU95_RS22095 (QSU95_22095) - 1422553..1423161 (-) 609 WP_158108526.1 KilA-N domain-containing protein -
  QSU95_RS22100 (QSU95_22100) - 1423772..1424074 (+) 303 WP_038151580.1 hypothetical protein -
  QSU95_RS22105 (QSU95_22105) - 1424186..1424674 (+) 489 WP_154179814.1 hypothetical protein -
  QSU95_RS22110 (QSU95_22110) - 1424804..1425034 (-) 231 WP_286213722.1 hypothetical protein -
  QSU95_RS23610 - 1424928..1425260 (-) 333 WP_350226289.1 KilA-N domain-containing protein -
  QSU95_RS22120 (QSU95_22120) - 1425898..1426149 (-) 252 WP_004726819.1 hypothetical protein -
  QSU95_RS22125 (QSU95_22125) - 1426140..1426370 (-) 231 WP_004726817.1 hypothetical protein -
  QSU95_RS22130 (QSU95_22130) - 1426381..1426797 (-) 417 WP_004726816.1 glycoside hydrolase family protein -
  QSU95_RS22135 (QSU95_22135) - 1426941..1427417 (-) 477 WP_286212849.1 hypothetical protein -
  QSU95_RS22140 (QSU95_22140) - 1427417..1428661 (-) 1245 WP_286212850.1 phage tail protein -
  QSU95_RS22145 (QSU95_22145) - 1428658..1429137 (-) 480 WP_199465274.1 hypothetical protein -
  QSU95_RS22150 (QSU95_22150) - 1429119..1430165 (-) 1047 WP_286212853.1 baseplate J/gp47 family protein -
  QSU95_RS22155 (QSU95_22155) - 1430162..1430548 (-) 387 WP_286212855.1 phage GP46 family protein -
  QSU95_RS22160 (QSU95_22160) - 1430545..1431120 (-) 576 WP_286212857.1 phage baseplate assembly protein V -
  QSU95_RS22165 (QSU95_22165) - 1431113..1432051 (-) 939 WP_286212858.1 phage tail protein -
  QSU95_RS22170 (QSU95_22170) - 1432048..1433238 (-) 1191 WP_286212859.1 DNA circularization N-terminal domain-containing protein -
  QSU95_RS23615 - 1434022..1434381 (-) 360 WP_158108535.1 terminase family protein -
  QSU95_RS22175 (QSU95_22175) - 1434627..1434878 (-) 252 WP_202649923.1 ogr/Delta-like zinc finger family protein -
  QSU95_RS22180 (QSU95_22180) - 1434888..1437518 (-) 2631 WP_286212862.1 replication endonuclease -
  QSU95_RS22185 (QSU95_22185) - 1437515..1437742 (-) 228 WP_286212863.1 hypothetical protein -
  QSU95_RS22190 (QSU95_22190) - 1437724..1438035 (-) 312 WP_020433788.1 hypothetical protein -
  QSU95_RS22195 (QSU95_22195) - 1438108..1438440 (-) 333 WP_286212864.1 hypothetical protein -
  QSU95_RS22200 (QSU95_22200) - 1438450..1438989 (-) 540 WP_004726786.1 phage regulatory CII family protein -
  QSU95_RS22205 (QSU95_22205) - 1439047..1439505 (-) 459 WP_286212866.1 hypothetical protein -
  QSU95_RS22210 (QSU95_22210) - 1439653..1440378 (+) 726 WP_286212867.1 S24 family peptidase -
  QSU95_RS22215 (QSU95_22215) - 1440419..1440652 (-) 234 WP_038127775.1 hypothetical protein -
  QSU95_RS22220 (QSU95_22220) - 1440651..1441004 (+) 354 WP_038127776.1 hypothetical protein -
  QSU95_RS22225 (QSU95_22225) - 1441151..1441792 (-) 642 WP_222735281.1 hypothetical protein -
  QSU95_RS22230 (QSU95_22230) - 1441776..1441994 (-) 219 WP_222735277.1 hypothetical protein -
  QSU95_RS22235 (QSU95_22235) - 1442423..1442791 (-) 369 WP_222735275.1 hypothetical protein -
  QSU95_RS22240 (QSU95_22240) - 1442916..1443194 (-) 279 WP_222735272.1 hypothetical protein -
  QSU95_RS22250 (QSU95_22250) - 1443346..1444248 (-) 903 WP_222735269.1 hypothetical protein -
  QSU95_RS22255 (QSU95_22255) - 1444395..1444967 (-) 573 WP_286212868.1 DUF5677 domain-containing protein -
  QSU95_RS22260 (QSU95_22260) - 1444995..1445118 (-) 124 Protein_1342 DUF3265 domain-containing protein -
  QSU95_RS22265 (QSU95_22265) - 1445111..1445713 (-) 603 WP_180768032.1 hypothetical protein -
  QSU95_RS22270 (QSU95_22270) - 1445839..1446597 (-) 759 WP_222735264.1 SEC-C metal-binding domain-containing protein -
  QSU95_RS22275 (QSU95_22275) - 1446900..1447868 (+) 969 WP_222735261.1 tyrosine-type recombinase/integrase -
  QSU95_RS22280 (QSU95_22280) - 1448030..1448347 (-) 318 WP_004726770.1 DUF496 family protein -
  QSU95_RS22285 (QSU95_22285) - 1448537..1448734 (+) 198 WP_014257418.1 hypothetical protein -
  QSU95_RS22290 (QSU95_22290) - 1448778..1449413 (+) 636 WP_004726766.1 YceH family protein -
  QSU95_RS22295 (QSU95_22295) - 1449424..1449714 (+) 291 WP_232658979.1 GIY-YIG nuclease family protein -
  QSU95_RS22300 (QSU95_22300) luxP 1450134..1451231 (+) 1098 WP_004726763.1 autoinducer 2-binding periplasmic protein LuxP Regulator

Sequence


Protein


Download         Length: 365 a.a.        Molecular weight: 41539.74 Da        Isoelectric Point: 5.2793

>NTDB_id=846797 QSU95_RS22300 WP_004726763.1 1450134..1451231(+) (luxP) [Vibrio furnissii strain VFBJ05]
MKKTLFLSLLLGFTPFASSYSSQVLNGYWHYQEFLNANPQQKALTESLSDAVRQSSQRLTVKQQTPVTISVVYPGQQISD
YWVRNIKAFEMRLEELGIEYQINQVFTRPNQDTRQQSLSLMEAVKNNTDYLIFTLDTTRHRKFIEHVLNSSPTKLILQNI
TTPVRDWDERQPMMYVGFDHELGAQQLAQYYREHVPKGSKYSVLYFSEGYVSDARGDTFIQQMESTGDYQLASSYYTKAT
QESGYEATVNIVKNDPDIKFIYACSTDVALGAAKALQALKREDIQVNGWGGGSAELEALDEGHLDVTVMRINDDTGIAMA
EAIKRDLEGLAVPVVYSGDFEIVTKDDQPKKIGLFKQRAFRYSDR

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=846797 QSU95_RS22300 WP_004726763.1 1450134..1451231(+) (luxP) [Vibrio furnissii strain VFBJ05]
ATGAAGAAAACGCTTTTTCTTTCTCTTTTACTTGGTTTCACTCCTTTTGCCTCTTCGTATTCATCACAAGTGCTGAATGG
TTACTGGCATTATCAGGAATTTCTGAATGCCAATCCGCAACAAAAGGCACTGACTGAGTCGTTGTCTGATGCGGTGCGTC
AATCGTCTCAGCGGCTGACGGTCAAACAACAAACGCCGGTGACCATTTCGGTGGTTTATCCGGGGCAGCAGATCTCCGAT
TACTGGGTGCGCAACATCAAAGCATTTGAAATGCGATTGGAAGAGTTAGGCATCGAATACCAGATTAATCAGGTGTTTAC
GCGCCCGAACCAAGACACCCGCCAACAAAGCTTGTCGTTGATGGAAGCGGTGAAGAACAATACGGATTATTTGATTTTCA
CGCTGGATACAACGCGCCACCGCAAGTTTATTGAACACGTTCTGAATTCGTCACCGACCAAATTGATTTTGCAGAATATC
ACCACGCCGGTTCGAGACTGGGATGAACGCCAGCCGATGATGTACGTTGGGTTTGACCATGAACTCGGTGCGCAGCAACT
TGCACAGTATTATCGCGAGCATGTTCCCAAAGGCAGCAAGTATTCGGTGCTGTATTTCTCTGAAGGATACGTCAGCGATG
CGCGTGGCGACACCTTCATTCAGCAGATGGAAAGCACAGGCGATTATCAGTTGGCCTCGTCGTATTACACCAAAGCGACA
CAAGAAAGTGGCTATGAAGCTACCGTTAACATTGTCAAAAATGACCCGGATATTAAATTTATTTACGCCTGTTCCACCGA
TGTGGCACTGGGCGCAGCCAAGGCGCTACAAGCATTAAAACGTGAAGATATTCAGGTGAATGGCTGGGGTGGCGGCTCGG
CAGAACTAGAAGCCTTGGATGAAGGTCATCTTGATGTTACTGTCATGAGAATCAATGATGATACCGGCATTGCGATGGCG
GAAGCGATCAAACGTGATTTGGAAGGTTTGGCCGTGCCCGTGGTGTATTCCGGTGACTTTGAGATCGTGACCAAAGACGA
TCAGCCGAAAAAAATTGGTTTGTTTAAGCAACGCGCCTTTCGTTATTCCGACCGTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Q2SGB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

70.411

100

0.704