Detailed information NTG0846789

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QSU95_RS14240
• Genome accession: NZ_CP128204
• Coordinates: 3027472..3028479 (-)
• Length: 335 a.a.
• NCBI ID: WP_286211344.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain VFBJ05
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3022472..3033479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSU95_RS14215 (QSU95_14215)	rraA	3023113..3023640 (-)	528	WP_286211341.1	ribonuclease E activity regulator RraA	-
QSU95_RS14220 (QSU95_14220)	-	3023716..3024633 (-)	918	WP_014204315.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QSU95_RS14225 (QSU95_14225)	hslU	3024727..3026058 (-)	1332	WP_055465848.1	HslU--HslV peptidase ATPase subunit	-
QSU95_RS14230 (QSU95_14230)	hslV	3026095..3026652 (-)	558	WP_286211342.1	ATP-dependent protease subunit HslV	-
QSU95_RS14235 (QSU95_14235)	-	3026791..3027342 (-)	552	WP_286211343.1	SPOR domain-containing protein	-
QSU95_RS14240 (QSU95_14240)	cytR	3027472..3028479 (-)	1008	WP_286211344.1	DNA-binding transcriptional regulator CytR	Regulator
QSU95_RS14245 (QSU95_14245)	priA	3028787..3030988 (-)	2202	WP_286211345.1	primosomal protein N'	-
QSU95_RS14250 (QSU95_14250)	rpmE	3031235..3031453 (+)	219	WP_004728523.1	50S ribosomal protein L31	-
QSU95_RS14255 (QSU95_14255)	-	3031664..3032938 (+)	1275	WP_014204309.1	malic enzyme-like NAD(P)-binding protein	-
QSU95_RS14260 (QSU95_14260)	metJ	3033015..3033332 (-)	318	WP_004728521.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36854.34 Da
• Isoelectric Point: 6.3510

>NTDB_id=846789 QSU95_RS14240 WP_286211344.1 3027472..3028479(-) (cytR) [Vibrio furnissii strain VFBJ05]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQIAGPEAAVLCQFRQQGYQQALRRAGISRNPTYSTIGDFTFESGAKAVRQLMALPEPPTA
IFCHNDTMAIGAIQEAKRLGVRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLD
TQLVIRESAAPPRSA

Nucleotide

• Length: 1008 bp

>NTDB_id=846789 QSU95_RS14240 WP_286211344.1 3027472..3028479(-) (cytR) [Vibrio furnissii strain VFBJ05]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTATCGACGGCGACAGTCTCGCGCGCTCTGATGAATCCCGAGAA
AGTTTCAGCCTCAACCCGTAAACGGGTTGAAGAGGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTTTAGCCCGAAATC
TGCGTCGCAATGAATCGAAAACCATTGTCGCGATCGTGCCGGACATCTGTGATCCTTATTACACCGAAATTATTCGTGGT
ATCGAAGACGCCGCGATGGAACACGGTTATCTGGTACTGCTGGGTGACAGTGGTCAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACTTGGTGTTTACCAAACAGGCGGACGGTATGCTATTGCTGGGGACCGATTTGCCGTTTGACGTGAGCAAACCTG
AGCAGAAAAACCTACCACCGATGGTGATGGCGTGTGAGTTTGCGCCAGAGCTTGAATTGCCGACGGTGCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTGAACTATCTGACGCAGATGGGGCACAAACGCATCGCGCAGATTGCCGGCCCTGAAGC
GGCGGTGTTGTGTCAATTCCGTCAGCAAGGGTATCAACAAGCCCTGCGCCGCGCGGGGATTTCACGCAATCCAACCTACA
GTACCATCGGTGACTTTACGTTTGAGTCGGGTGCCAAAGCGGTGCGCCAATTGATGGCCCTGCCGGAGCCGCCGACAGCC
ATTTTCTGTCACAACGATACCATGGCGATTGGTGCCATTCAGGAAGCCAAGCGTTTGGGCGTGCGTGTGCCGCAAGACCT
GTCTGTGGTCGGCTTTGATGATATTCAGTTTGCGCAGTACTGCGATCCACCGCTAACCACCATTTCTCAGCCGCGTTACG
AGATCGGCCGTCAGGCGATGTTGATGATGCTTGAGTTACTGCGGGGTCATGATGTGCGTGCGGGCTCGCGTCTGCTCGAC
ACCCAATTGGTCATTCGCGAGAGTGCAGCGCCGCCCCGCTCGGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.373	99.104	0.925
cytR	Vibrio parahaemolyticus RIMD 2210633	90.149	100	0.901