Detailed information NTG0846788

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QSU95_RS14045
• Genome accession: NZ_CP128204
• Coordinates: 2987246..2988250 (-)
• Length: 334 a.a.
• NCBI ID: WP_286211334.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain VFBJ05
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2982246..2993250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSU95_RS14020 (QSU95_14020)	aroK	2983126..2983644 (-)	519	WP_004728569.1	shikimate kinase AroK	-
QSU95_RS14025 (QSU95_14025)	pilQ	2983832..2985556 (-)	1725	WP_286211333.1	type IV pilus secretin PilQ family protein	Machinery gene
QSU95_RS14030 (QSU95_14030)	pilP	2985581..2986093 (-)	513	WP_154180461.1	pilus assembly protein PilP	Machinery gene
QSU95_RS14035 (QSU95_14035)	pilO	2986083..2986673 (-)	591	WP_232658224.1	type 4a pilus biogenesis protein PilO	Machinery gene
QSU95_RS14040 (QSU95_14040)	pilN	2986666..2987256 (-)	591	WP_055465837.1	PilN domain-containing protein	Machinery gene
QSU95_RS14045 (QSU95_14045)	pilM	2987246..2988250 (-)	1005	WP_286211334.1	type IV pilus assembly protein PilM	Machinery gene
QSU95_RS14050 (QSU95_14050)	-	2988394..2990874 (+)	2481	WP_038152617.1	PBP1A family penicillin-binding protein	-
QSU95_RS14055 (QSU95_14055)	oxyR	2990961..2991857 (-)	897	WP_014204332.1	DNA-binding transcriptional regulator OxyR	-
QSU95_RS14060 (QSU95_14060)	-	2992001..2992735 (+)	735	WP_004728561.1	glutathione peroxidase	-
QSU95_RS14065 (QSU95_14065)	-	2992859..2993122 (+)	264	WP_004728560.1	DUF3624 domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36820.11 Da
• Isoelectric Point: 6.6617

>NTDB_id=846788 QSU95_RS14045 WP_286211334.1 2987246..2988250(-) (pilM) [Vibrio furnissii strain VFBJ05]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSDDIFADNHTLDYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSDLDASEQEFAVYQAFSHQSPFPIDDLSLDFVPSGDNPAGRSTSTLYQVYATRREVVDNRLSVASKAGFEP
LLLDVQVHGLLQIWQWVSRAQQRDDWMLVDVGLTQTTLCMDFADKAPFYKDIPLGTRQWHADPTPHPVPLSEPPMAGVNE
LVERIARQVQLLLSLQGHQALGGIWLSGGGATTEGLGAALAARLNLPCELFHPLTGFVTRRRMRARVPDDLQRFSTAAGL
ALRGLNWLERDHGA

Nucleotide

• Length: 1005 bp

>NTDB_id=846788 QSU95_RS14045 WP_286211334.1 2987246..2988250(-) (pilM) [Vibrio furnissii strain VFBJ05]
ATGGGTAAATCATTAGTTACAGGTGTCGATATCGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAGGGCGAATC
GTATTCGCTGGTCGGCTACCAAGAAATAGTCGTATCCGACGATATTTTCGCTGATAACCACACGCTGGATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTACCGTTATTTAGTCGCAAAGTTGCGCTGGCTGTGCCGGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGATTTAGATGCCAGCGAACAAGAATTTGCTGTCTATCAGGCGTTTTCCCA
TCAATCGCCGTTTCCCATCGATGATCTGAGTTTGGATTTCGTACCAAGCGGCGATAACCCCGCCGGGCGCAGCACCAGCA
CCCTGTATCAAGTGTACGCCACGCGACGCGAAGTCGTCGATAACCGGTTATCGGTGGCGAGCAAAGCGGGCTTTGAGCCG
CTGCTGCTCGATGTGCAGGTGCATGGGTTGCTCCAGATTTGGCAATGGGTGAGTCGCGCGCAGCAGCGCGACGATTGGAT
GCTGGTGGACGTCGGGTTGACGCAAACCACGTTATGCATGGATTTCGCCGATAAAGCGCCCTTCTATAAAGACATTCCGC
TGGGAACGCGTCAATGGCATGCCGACCCCACGCCCCATCCTGTGCCGCTGAGCGAGCCACCTATGGCTGGAGTCAACGAG
CTGGTTGAGCGAATTGCGCGCCAAGTGCAACTGCTGTTGTCCTTGCAGGGCCATCAAGCGCTGGGCGGGATTTGGCTGTC
GGGCGGTGGGGCGACGACGGAAGGCCTCGGCGCGGCTTTGGCTGCGCGACTGAATCTGCCGTGTGAACTGTTTCATCCAC
TGACGGGATTTGTGACGCGCCGCCGCATGCGAGCGCGTGTGCCTGACGATCTGCAACGCTTTAGTACGGCGGCCGGCTTG
GCGCTGCGCGGACTCAACTGGTTGGAGCGTGACCATGGTGCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-324)

• Type IV pilus assembly protein PilM; (PilM_2) (8-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	64.307	100	0.653
pilM	Vibrio campbellii strain DS40M4	45.266	100	0.458