Detailed information NTG0846741

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QSU96_RS14620
• Genome accession: NZ_CP128200
• Coordinates: 3120864..3121871 (-)
• Length: 335 a.a.
• NCBI ID: WP_004728525.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain VFBJ07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3115864..3126871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSU96_RS14595 (QSU96_14595)	rraA	3116505..3117032 (-)	528	WP_286211341.1	ribonuclease E activity regulator RraA	-
QSU96_RS14600 (QSU96_14600)	-	3117108..3118025 (-)	918	WP_014204315.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QSU96_RS14605 (QSU96_14605)	hslU	3118119..3119450 (-)	1332	WP_055465848.1	HslU--HslV peptidase ATPase subunit	-
QSU96_RS14610 (QSU96_14610)	hslV	3119487..3120044 (-)	558	WP_014204312.1	ATP-dependent protease subunit HslV	-
QSU96_RS14615 (QSU96_14615)	-	3120183..3120734 (-)	552	WP_038152602.1	SPOR domain-containing protein	-
QSU96_RS14620 (QSU96_14620)	cytR	3120864..3121871 (-)	1008	WP_004728525.1	DNA-binding transcriptional regulator CytR	Regulator
QSU96_RS14625 (QSU96_14625)	priA	3122180..3124381 (-)	2202	WP_286279670.1	primosomal protein N'	-
QSU96_RS14630 (QSU96_14630)	rpmE	3124628..3124846 (+)	219	WP_004728523.1	50S ribosomal protein L31	-
QSU96_RS14635 (QSU96_14635)	-	3125057..3126331 (+)	1275	WP_004728522.1	malic enzyme-like NAD(P)-binding protein	-
QSU96_RS14640 (QSU96_14640)	metJ	3126408..3126725 (-)	318	WP_004728521.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36886.40 Da
• Isoelectric Point: 6.3510

>NTDB_id=846741 QSU96_RS14620 WP_004728525.1 3120864..3121871(-) (cytR) [Vibrio furnissii strain VFBJ07]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQIAGPEAAVLCQFRQQGYQQALRRAGISRNPTYSTIGDFTFESGAKAVRQLMALPEPPTA
IFCHNDTMAIGAIQEAKRLGMRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLD
TQLVIRESAAPPRSA

Nucleotide

• Length: 1008 bp

>NTDB_id=846741 QSU96_RS14620 WP_004728525.1 3120864..3121871(-) (cytR) [Vibrio furnissii strain VFBJ07]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTATCGACGGCGACAGTCTCGCGCGCTCTGATGAATCCCGAGAA
AGTTTCAGCCTCAACCCGTAAACGGGTTGAAGAGGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTTTAGCCCGAAATC
TGCGTCGCAATGAATCGAAAACCATTGTCGCGATCGTGCCGGACATCTGTGATCCTTATTACACCGAAATTATTCGTGGT
ATCGAAGACGCTGCGATGGAACACGGTTATCTGGTACTGCTGGGTGACAGCGGTCAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACTTGGTGTTTACCAAACAGGCGGACGGTATGCTATTGCTGGGGACCGATTTGCCGTTTGACGTGAGCAAACCTG
AGCAGAAAAACCTACCACCGATGGTGATGGCGTGTGAGTTTGCGCCAGAACTTGAATTGCCGACGGTGCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTGAACTATCTGACGCAGATGGGGCACAAACGCATCGCGCAGATTGCTGGCCCTGAAGC
GGCGGTGTTGTGTCAGTTCCGTCAGCAAGGGTATCAACAAGCCCTGCGCCGCGCGGGGATTTCACGCAATCCAACCTACA
GTACCATCGGTGACTTTACGTTTGAGTCGGGTGCCAAAGCGGTGCGCCAATTGATGGCCCTGCCGGAGCCGCCGACAGCC
ATTTTCTGTCACAACGATACCATGGCGATTGGTGCCATTCAGGAAGCCAAGCGTTTGGGCATGCGTGTGCCGCAAGACCT
GTCTGTGGTCGGCTTTGATGACATTCAGTTTGCGCAGTACTGCGATCCACCGCTAACCACCATTTCTCAGCCGCGTTACG
AGATCGGCCGTCAGGCGATGTTGATGATGCTTGAGTTACTGCGGGGTCATGATGTGCGTGCGGGCTCGCGTCTGCTCGAC
ACCCAATTGGTCATTCGCGAGAGTGCAGCGCCGCCCCGCTCGGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.373	99.104	0.925
cytR	Vibrio parahaemolyticus RIMD 2210633	90.149	100	0.901