Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   V3434_RS00095 Genome accession   NZ_CP144271
Coordinates   18826..19644 (-) Length   272 a.a.
NCBI ID   WP_001124416.1    Uniprot ID   -
Organism   Staphylococcus aureus strain LA31     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 13826..24644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3434_RS00075 (V3434_00075) - 14919..15896 (+) 978 WP_000379101.1 metal-dependent hydrolase -
  V3434_RS00080 (V3434_00080) - 16157..16993 (-) 837 WP_000886473.1 membrane protein -
  V3434_RS00085 (V3434_00085) - 17002..18519 (-) 1518 WP_000535846.1 ABC transporter ATP-binding protein -
  V3434_RS00090 (V3434_00090) - 18534..18848 (-) 315 WP_000435806.1 YfhH family protein -
  V3434_RS00095 (V3434_00095) recX 18826..19644 (-) 819 WP_001124416.1 recombination regulator RecX Regulator
  V3434_RS00100 (V3434_00100) sgtB 19905..20714 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  V3434_RS00105 (V3434_00105) - 21055..21570 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  V3434_RS00110 (V3434_00110) - 21700..21861 (-) 162 WP_001005407.1 SE1561 family protein -
  V3434_RS00115 (V3434_00115) yfkAB 22085..23236 (+) 1152 WP_001089599.1 radical SAM/CxCxxxxC motif protein YfkAB -
  V3434_RS00120 (V3434_00120) - 23498..24028 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32245.07 Da        Isoelectric Point: 5.9190

>NTDB_id=846667 V3434_RS00095 WP_001124416.1 18826..19644(-) (recX) [Staphylococcus aureus strain LA31]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTDKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=846667 V3434_RS00095 WP_001124416.1 18826..19644(-) (recX) [Staphylococcus aureus strain LA31]
ATGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGATAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAACAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993