Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   P3L48_RS07790 Genome accession   NZ_CP128196
Coordinates   1658826..1659773 (+) Length   315 a.a.
NCBI ID   WP_286231250.1    Uniprot ID   -
Organism   Neobacillus mesonae strain NS-6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1653826..1664773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L48_RS07770 clpB 1654028..1656625 (+) 2598 WP_286231247.1 ATP-dependent chaperone ClpB -
  P3L48_RS07775 - 1656661..1656843 (-) 183 WP_066394954.1 YjzD family protein -
  P3L48_RS07780 - 1657011..1657733 (+) 723 WP_286231248.1 hydrolase -
  P3L48_RS07785 - 1657812..1658639 (+) 828 WP_286231249.1 hypothetical protein -
  P3L48_RS07790 med 1658826..1659773 (+) 948 WP_286231250.1 BMP family ABC transporter substrate-binding protein Regulator
  P3L48_RS07795 comZ 1659789..1659977 (+) 189 WP_066394970.1 ComZ family protein Regulator
  P3L48_RS07800 - 1660007..1660375 (-) 369 WP_286231251.1 hypothetical protein -
  P3L48_RS07805 - 1660570..1661502 (+) 933 WP_066394985.1 beta-ketoacyl-ACP synthase III -
  P3L48_RS07810 fabF 1661561..1662799 (+) 1239 WP_066394995.1 beta-ketoacyl-ACP synthase II -
  P3L48_RS07815 - 1662919..1663710 (+) 792 WP_286231252.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 35308.20 Da        Isoelectric Point: 4.8757

>NTDB_id=846660 P3L48_RS07790 WP_286231250.1 1658826..1659773(+) (med) [Neobacillus mesonae strain NS-6]
MLNRFGIIFICLLLLGGCSGPNPKGKLQKVGLLVPETINDQVWGTKGFKGMLRIQSKFDVDVFYKEGMNSQSAVERAVKE
FSQKGVNMIFGHGSEYGEYFNNISKDYPEIHFVSFNSDAKNSNTTSLSFKAYAMGFFGGMVAAHMSKLKKVGVLAAYEWQ
PEIEGFYQGAMAEDKNIQVSIDYVGNWDDEQKAVQLADKMIEKGVDVIYPAGDGYNVPVIERVKERGLYVIGYVSEQSDL
GESTVLTSTIQQVDKLYEKVAEQYNEGELESGNLFFDFQDDVICLGKFSPLVSKDFIQKMNRYIETYKVTGKLPN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=846660 P3L48_RS07790 WP_286231250.1 1658826..1659773(+) (med) [Neobacillus mesonae strain NS-6]
ATGCTAAACCGTTTCGGTATAATTTTTATATGCCTTTTACTGCTTGGCGGTTGCAGCGGACCGAATCCCAAAGGAAAATT
GCAAAAGGTTGGCCTTTTAGTTCCTGAAACCATTAATGACCAAGTTTGGGGAACAAAAGGCTTTAAAGGAATGTTAAGAA
TACAATCAAAATTTGATGTAGATGTTTTCTATAAAGAAGGGATGAATTCACAGTCTGCAGTTGAACGGGCAGTAAAAGAA
TTTTCACAAAAAGGAGTAAATATGATATTCGGCCATGGCTCGGAATACGGTGAATATTTCAATAATATTTCTAAAGACTA
TCCGGAAATTCATTTTGTTTCCTTTAATTCTGATGCTAAAAATTCAAACACCACCAGCTTAAGTTTTAAGGCATACGCAA
TGGGGTTTTTTGGAGGGATGGTTGCGGCGCATATGTCAAAACTAAAAAAGGTTGGCGTACTGGCAGCATACGAATGGCAG
CCGGAAATTGAAGGATTCTACCAAGGGGCAATGGCGGAGGACAAAAACATTCAGGTGAGTATCGACTATGTGGGTAACTG
GGATGACGAGCAGAAAGCCGTTCAATTAGCAGATAAGATGATAGAGAAAGGTGTTGATGTCATATACCCTGCCGGCGATG
GTTATAATGTTCCTGTTATTGAAAGAGTAAAAGAGCGGGGGCTGTATGTGATTGGCTACGTTTCCGAACAATCTGACCTA
GGAGAATCTACTGTTTTAACAAGTACCATCCAACAGGTTGACAAATTATATGAGAAAGTAGCAGAACAATATAATGAGGG
CGAGCTTGAGTCAGGGAATTTATTTTTCGATTTTCAAGATGATGTTATTTGTTTAGGGAAATTCAGCCCTTTGGTCAGTA
AGGATTTTATTCAAAAAATGAATCGTTATATTGAAACATATAAAGTTACAGGGAAATTACCGAATTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.096

99.683

0.549