Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P3L48_RS03125 Genome accession   NZ_CP128196
Coordinates   677913..678863 (+) Length   316 a.a.
NCBI ID   WP_286230664.1    Uniprot ID   -
Organism   Neobacillus mesonae strain NS-6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 672913..683863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3L48_RS03105 - 673707..675221 (+) 1515 WP_286230661.1 acetyl-CoA hydrolase/transferase family protein -
  P3L48_RS03110 - 675454..676002 (+) 549 WP_286230662.1 histidine phosphatase family protein -
  P3L48_RS03115 - 676098..677141 (+) 1044 WP_286232228.1 DUF418 domain-containing protein -
  P3L48_RS03120 - 677182..677667 (-) 486 WP_286230663.1 hypothetical protein -
  P3L48_RS03125 ceuB 677913..678863 (+) 951 WP_286230664.1 ABC transporter permease Machinery gene
  P3L48_RS03130 - 678856..679806 (+) 951 WP_286230665.1 iron chelate uptake ABC transporter family permease subunit -
  P3L48_RS03135 - 679803..680564 (+) 762 WP_286230666.1 ABC transporter ATP-binding protein -
  P3L48_RS03140 - 680584..681537 (+) 954 WP_286230667.1 siderophore ABC transporter substrate-binding protein -
  P3L48_RS03145 - 681929..683389 (+) 1461 WP_286230668.1 PAS domain S-box protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34791.08 Da        Isoelectric Point: 10.1454

>NTDB_id=846650 P3L48_RS03125 WP_286230664.1 677913..678863(+) (ceuB) [Neobacillus mesonae strain NS-6]
MKKRYLLLTVLILSAVSLFIGVSRISPLDLLNVQSEETQIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMLEKMAVAFAFALAGTFLFMLILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYKADVI
QNMSAWLQGDFSMIMKGRYELLYISVPIIIIAYLYANRFTVAGMGEDFSKNLGLAYRRIVNIGLILVALITATVVLTVGT
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLICDILGRVIIYPYEISISLMVGVIGSGIFLYLLFRRKDYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=846650 P3L48_RS03125 WP_286230664.1 677913..678863(+) (ceuB) [Neobacillus mesonae strain NS-6]
ATGAAGAAAAGATATTTATTACTTACAGTACTAATATTGTCTGCCGTTTCATTGTTTATTGGCGTCAGCAGGATCTCTCC
TTTAGATTTATTGAACGTTCAATCTGAGGAAACGCAAATCTTTTTAATCAGCCGGCTGCCAAGGCTTGTGGCAATTTTGC
TGGCCGGGGCAGGAATGAGCATTGCGGGATTAATCATGCAGCAATTGAGCCGGAATAAATTTGTCTCGCCAACAACGGCT
GGAACGTTGGACGCCACAAGGCTGGGAATACTCGTTTCCATGCTGCTATTTGCAAATGCGTCCATGCTTGAAAAAATGGC
AGTTGCTTTTGCTTTCGCTCTTGCCGGGACGTTTTTGTTCATGCTGATTCTTGACCGTATCAAGTTTAAGGATGCCATAT
TCATTCCGTTGGTAGGGTTAATGTTCGGAAATATCCTGTCTTCCGTAACCACCTTCTTCGCCTATAAGGCGGACGTGATT
CAAAATATGTCTGCGTGGCTGCAAGGGGATTTTTCCATGATCATGAAGGGCCGATATGAATTACTGTACATAAGTGTTCC
AATTATCATCATTGCCTATTTATACGCAAATCGTTTTACGGTTGCAGGGATGGGGGAAGATTTTTCAAAAAATCTTGGGC
TTGCATATCGGCGAATCGTGAATATCGGATTAATTCTTGTTGCACTCATAACTGCGACAGTTGTACTAACGGTCGGAACG
ATTCCGTTTCTTGGATTAATCATTCCTAACATTATCTCGATTTTTAAAGGCGACCACTTACAAAAAACTTTGCCGCATAC
GGCACTGCTGGGCGCGATATTCCTTCTCATTTGTGACATTTTAGGCAGGGTGATCATTTATCCTTATGAGATTTCGATCA
GTCTTATGGTTGGTGTCATCGGAAGCGGCATCTTCTTATACCTGCTGTTCAGGAGGAAAGACTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.396

99.051

0.519