Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V3435_RS06770 Genome accession   NZ_CP144270
Coordinates   1393741..1394481 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain LA52     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388741..1399481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3435_RS06745 (V3435_06740) hemH 1389619..1390542 (-) 924 WP_000162876.1 ferrochelatase -
  V3435_RS06750 (V3435_06745) hemE 1390599..1391636 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  V3435_RS06755 (V3435_06750) - 1391626..1391712 (-) 87 WP_031875110.1 hypothetical protein -
  V3435_RS06760 (V3435_06755) traP 1391898..1392401 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  V3435_RS06765 (V3435_06760) - 1392525..1393748 (-) 1224 WP_001245751.1 ABC transporter permease -
  V3435_RS06770 (V3435_06765) pptA 1393741..1394481 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  V3435_RS06775 (V3435_06770) - 1394615..1395037 (+) 423 WP_000004984.1 HIT family protein -
  V3435_RS06780 (V3435_06775) - 1395179..1395544 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  V3435_RS06785 (V3435_06780) - 1396276..1396833 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  V3435_RS06790 (V3435_06785) - 1397038..1398000 (+) 963 WP_000782119.1 foldase protein PrsA -
  V3435_RS06795 (V3435_06790) yhaM 1398121..1399062 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=846642 V3435_RS06770 WP_000216874.1 1393741..1394481(-) (pptA) [Staphylococcus aureus strain LA52]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=846642 V3435_RS06770 WP_000216874.1 1393741..1394481(-) (pptA) [Staphylococcus aureus strain LA52]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGACATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCGACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545