Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QRA13_RS10505 Genome accession   NZ_CP128184
Coordinates   2191240..2191404 (-) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2186240..2196404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS10505 (QRA13_10505) comS 2191240..2191404 (-) 165 WP_269195014.1 competence protein ComS Regulator
  QRA13_RS10510 (QRA13_10510) srfAB 2191469..2194513 (-) 3045 Protein_2068 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=846503 QRA13_RS10505 WP_269195014.1 2191240..2191404(-) (comS) [Bacillus velezensis strain YJ0-1 isolate soil]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=846503 QRA13_RS10505 WP_269195014.1 2191240..2191404(-) (comS) [Bacillus velezensis strain YJ0-1 isolate soil]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5