Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QRA13_RS04760 Genome accession   NZ_CP128184
Coordinates   1103705..1104169 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1098705..1109169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS04735 (QRA13_04735) - 1099214..1099765 (-) 552 WP_045207276.1 hypothetical protein -
  QRA13_RS04740 (QRA13_04740) fadH 1099874..1100638 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  QRA13_RS04745 (QRA13_04745) - 1100782..1101645 (+) 864 WP_045207275.1 metallophosphoesterase -
  QRA13_RS04750 (QRA13_04750) - 1101720..1102214 (+) 495 WP_088462390.1 L,D-transpeptidase family protein -
  QRA13_RS04755 (QRA13_04755) - 1102290..1103582 (+) 1293 WP_007611093.1 MFS transporter -
  QRA13_RS04760 (QRA13_04760) kre 1103705..1104169 (+) 465 WP_003154622.1 YkyB family protein Regulator
  QRA13_RS04765 (QRA13_04765) cheV 1104213..1105124 (-) 912 WP_038457848.1 chemotaxis protein CheV -
  QRA13_RS04770 (QRA13_04770) - 1105313..1105474 (+) 162 WP_007409608.1 hypothetical protein -
  QRA13_RS04775 (QRA13_04775) - 1105675..1106844 (+) 1170 WP_007611083.1 aminotransferase A -
  QRA13_RS04780 (QRA13_04780) - 1106869..1108689 (-) 1821 WP_045207272.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=846482 QRA13_RS04760 WP_003154622.1 1103705..1104169(+) (kre) [Bacillus velezensis strain YJ0-1 isolate soil]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=846482 QRA13_RS04760 WP_003154622.1 1103705..1104169(+) (kre) [Bacillus velezensis strain YJ0-1 isolate soil]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCATTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929