Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRA13_RS00195 Genome accession   NZ_CP128184
Coordinates   33531..34331 (+) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain YJ0-1 isolate soil     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 28531..39331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA13_RS00175 (QRA13_00175) - 28653..29498 (+) 846 WP_007612503.1 TlyA family RNA methyltransferase -
  QRA13_RS00180 (QRA13_00180) argR 29595..30044 (+) 450 WP_003153173.1 transcriptional regulator ArgR -
  QRA13_RS00185 (QRA13_00185) recN 30076..31806 (+) 1731 WP_224223669.1 DNA repair protein RecN Machinery gene
  QRA13_RS00190 (QRA13_00190) spoIVB 31970..33250 (+) 1281 WP_224223668.1 SpoIVB peptidase -
  QRA13_RS00195 (QRA13_00195) spo0A 33531..34331 (+) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  QRA13_RS00200 (QRA13_00200) - 35151..35792 (+) 642 WP_224223667.1 ApaLI family restriction endonuclease -
  QRA13_RS00205 (QRA13_00205) - 35800..37008 (+) 1209 WP_224223666.1 DNA methyltransferase -
  QRA13_RS00210 (QRA13_00210) - 37532..37627 (+) 96 Protein_41 hypothetical protein -
  QRA13_RS00215 (QRA13_00215) alr 37775..38956 (-) 1182 WP_038459148.1 alanine racemase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=846474 QRA13_RS00195 WP_003153177.1 33531..34331(+) (spo0A) [Bacillus velezensis strain YJ0-1 isolate soil]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=846474 QRA13_RS00195 WP_003153177.1 33531..34331(+) (spo0A) [Bacillus velezensis strain YJ0-1 isolate soil]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCGTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTAACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTTATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCCTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCAAGTTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97