NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	QRD89_RS06265	Genome accession	NZ_CP128168
Coordinates	1190651..1191604 (+)	Length	317 a.a.
NCBI ID	WP_008636488.1	Uniprot ID	L5N788
Organism	Halobacillus sp. ACCC02827
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1185651..1196604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRD89_RS06245 (QRD89_06245)	leuC	1186567..1187979 (+)	1413	WP_026578407.1	3-isopropylmalate dehydratase large subunit	-
QRD89_RS06250 (QRD89_06250)	leuD	1187984..1188589 (+)	606	WP_008636491.1	3-isopropylmalate dehydratase small subunit	-
QRD89_RS06255 (QRD89_06255)	ilvA	1188604..1189563 (+)	960	WP_035388525.1	threonine ammonia-lyase	-
QRD89_RS06260 (QRD89_06260)	-	1189669..1190472 (-)	804	WP_286096518.1	alpha/beta hydrolase	-
QRD89_RS06265 (QRD89_06265)	ceuB	1190651..1191604 (+)	954	WP_008636488.1	ABC transporter permease	Machinery gene
QRD89_RS06270 (QRD89_06270)	-	1191594..1192541 (+)	948	WP_286096519.1	iron chelate uptake ABC transporter family permease subunit	-
QRD89_RS06275 (QRD89_06275)	-	1192538..1193293 (+)	756	WP_286096520.1	ABC transporter ATP-binding protein	-
QRD89_RS06280 (QRD89_06280)	-	1193309..1194265 (+)	957	WP_286096521.1	siderophore ABC transporter substrate-binding protein	-
QRD89_RS06285 (QRD89_06285)	-	1194350..1195171 (+)	822	WP_062512984.1	MerR family transcriptional regulator	-
QRD89_RS06290 (QRD89_06290)	-	1195210..1195410 (-)	201	WP_026578414.1	hypothetical protein	-
QRD89_RS06295 (QRD89_06295)	-	1195557..1195979 (+)	423	WP_008636481.1	DUF1801 domain-containing protein	-
QRD89_RS06300 (QRD89_06300)	-	1196101..1196364 (+)	264	WP_008636480.1	hypothetical protein	-

Sequence

Protein

Download Length: 317 a.a. Molecular weight: 34917.02 Da Isoelectric Point: 9.8031

                                >NTDB_id=846386 QRD89_RS06265 WP_008636488.1 1190651..1191604(+) (ceuB) [Halobacillus sp. ACCC02827]

MKRRYLFILLAVLSWLSLVIGVSDLPMLQVHTWDESQWKVFWVSRFPRLVSILIAGMSMAIGGLIMQQLSRNKFVSPTTA

GTIDSARLGIVVALLLFSSASPLIQTLIAFLFALAGTMLFMKILDGIKLKDAILIPLVGIMLGNVIGSITTFFAYQYDLI

QSIGSWLQGDFSMILKGDYELLYLSIPLVILAYLFAHRFTIAGMGEDFSKNLGMNHKQVVYIGLFIVALMTSVVVLTVGS

IPFLGLIVPNIVSIYRGDHLKNSISHTALLGALFVLACDIIGRIIIYPYEIPIGVTVGVIGSGLFLYLLFRRKAYAA

Nucleotide

Download Length: 954 bp

                                >NTDB_id=846386 QRD89_RS06265 WP_008636488.1 1190651..1191604(+) (ceuB) [Halobacillus sp. ACCC02827]

ATGAAGCGTAGGTATTTATTCATTCTTTTAGCGGTACTGTCTTGGTTATCGCTCGTCATCGGTGTTTCGGATCTGCCGAT

GCTCCAAGTACATACATGGGATGAATCGCAGTGGAAGGTATTCTGGGTGAGCAGATTCCCGCGGCTCGTCAGTATCCTTA

TCGCCGGCATGAGCATGGCGATCGGGGGATTGATTATGCAGCAGCTGAGCAGGAACAAGTTCGTATCCCCGACGACTGCC

GGAACGATCGATTCCGCACGGCTCGGAATCGTTGTGGCGCTTCTTTTGTTCTCATCAGCGAGCCCGTTAATCCAGACGTT

GATTGCGTTTCTCTTCGCATTGGCGGGGACGATGTTGTTTATGAAGATTCTCGATGGAATCAAGCTGAAGGATGCAATCC

TCATTCCGCTTGTCGGGATCATGCTTGGGAATGTCATCGGTTCGATCACGACATTCTTTGCCTATCAGTATGATTTGATC

CAGAGCATCGGATCATGGCTCCAGGGCGATTTCTCAATGATTTTGAAGGGGGACTATGAGCTGCTTTATCTCAGTATCCC

GCTTGTCATTCTCGCATACCTCTTTGCGCATCGATTCACGATCGCGGGAATGGGCGAAGATTTCTCGAAGAATCTCGGGA

TGAACCATAAGCAGGTCGTCTACATAGGTTTGTTCATCGTCGCACTGATGACTTCGGTCGTTGTCCTGACGGTGGGATCG

ATTCCTTTTCTTGGCTTAATCGTCCCGAACATCGTCTCAATCTACAGGGGGGACCACTTAAAGAACAGTATCAGCCATAC

GGCGCTGCTTGGTGCATTATTTGTCCTCGCCTGTGACATTATTGGAAGAATCATTATTTATCCGTATGAAATCCCGATCG

GCGTGACGGTCGGAGTCATCGGAAGCGGTCTGTTCCTCTATTTATTGTTTAGGAGAAAAGCGTATGCGGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	L5N788

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	50.479	98.738	0.498

Detailed information NTG0846386