Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | QRE67_RS02430 | Genome accession | NZ_CP128153 |
| Coordinates | 492272..493225 (+) | Length | 317 a.a. |
| NCBI ID | WP_286123379.1 | Uniprot ID | - |
| Organism | Bacillus sp. DX3.1 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 428457..508310 | 492272..493225 | within | 0 |
Gene organization within MGE regions
Location: 428457..508310
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRE67_RS02190 (QRE67_02185) | mtnK | 429659..430888 (+) | 1230 | WP_286123339.1 | S-methyl-5-thioribose kinase | - |
| QRE67_RS02195 (QRE67_02190) | mtnA | 430902..431960 (+) | 1059 | WP_286123340.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| QRE67_RS02200 (QRE67_02195) | - | 432065..432706 (+) | 642 | WP_286123341.1 | L-fuculose-phosphate aldolase | - |
| QRE67_RS02205 (QRE67_02200) | - | 432766..433770 (-) | 1005 | WP_286125172.1 | iron ABC transporter permease | - |
| QRE67_RS02210 (QRE67_02205) | - | 433770..434804 (-) | 1035 | WP_286125173.1 | iron ABC transporter permease | - |
| QRE67_RS02215 (QRE67_02210) | - | 434853..435776 (-) | 924 | WP_286123342.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| QRE67_RS02220 (QRE67_02215) | - | 436083..437132 (+) | 1050 | WP_286123343.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| QRE67_RS02225 (QRE67_02220) | - | 437285..438220 (+) | 936 | WP_286123344.1 | YwqG family protein | - |
| QRE67_RS02230 (QRE67_02225) | - | 438525..438893 (-) | 369 | WP_286123345.1 | hypothetical protein | - |
| QRE67_RS02235 (QRE67_02230) | - | 439082..439321 (+) | 240 | WP_286125174.1 | helix-turn-helix domain-containing protein | - |
| QRE67_RS02240 (QRE67_02235) | - | 439840..441066 (+) | 1227 | Protein_375 | ATP-binding protein | - |
| QRE67_RS02245 (QRE67_02240) | - | 441316..441696 (+) | 381 | WP_286123346.1 | hypothetical protein | - |
| QRE67_RS02250 (QRE67_02245) | - | 441721..442353 (-) | 633 | WP_286123347.1 | cyclase family protein | - |
| QRE67_RS02255 (QRE67_02250) | - | 442712..443821 (+) | 1110 | WP_286123348.1 | PRK06851 family protein | - |
| QRE67_RS02260 (QRE67_02255) | - | 444208..444987 (+) | 780 | WP_286123349.1 | nucleotidyltransferase domain-containing protein | - |
| QRE67_RS02265 (QRE67_02260) | - | 445006..445215 (-) | 210 | Protein_380 | MFS transporter | - |
| QRE67_RS02270 (QRE67_02265) | - | 445278..446804 (-) | 1527 | WP_286123350.1 | FAD-dependent oxidoreductase | - |
| QRE67_RS02275 (QRE67_02270) | - | 447470..448555 (+) | 1086 | WP_286123351.1 | acyl-CoA desaturase | - |
| QRE67_RS02280 (QRE67_02275) | - | 448784..449476 (-) | 693 | WP_286123352.1 | amino acid ABC transporter permease | - |
| QRE67_RS02285 (QRE67_02280) | - | 449642..450436 (-) | 795 | WP_286123353.1 | ABC transporter substrate-binding protein | - |
| QRE67_RS02290 (QRE67_02285) | - | 450605..451327 (-) | 723 | WP_286123354.1 | amino acid ABC transporter ATP-binding protein | - |
| QRE67_RS02295 (QRE67_02290) | argR | 451850..452299 (+) | 450 | WP_286123355.1 | arginine repressor | - |
| QRE67_RS02300 (QRE67_02295) | arcA | 452935..454167 (+) | 1233 | WP_286123356.1 | arginine deiminase | - |
| QRE67_RS02305 (QRE67_02300) | argF | 454198..455196 (+) | 999 | WP_286123357.1 | ornithine carbamoyltransferase | - |
| QRE67_RS02310 (QRE67_02305) | arcD | 455290..456705 (+) | 1416 | WP_286123358.1 | arginine-ornithine antiporter | - |
| QRE67_RS02315 (QRE67_02310) | arcC | 456768..457730 (+) | 963 | WP_286123359.1 | carbamate kinase | - |
| QRE67_RS02320 (QRE67_02315) | - | 458044..458733 (+) | 690 | WP_286123360.1 | Crp/Fnr family transcriptional regulator | - |
| QRE67_RS02325 (QRE67_02320) | - | 459124..459795 (+) | 672 | WP_286123361.1 | ABC transporter permease | - |
| QRE67_RS02330 (QRE67_02325) | - | 460260..461924 (+) | 1665 | WP_286123362.1 | alpha-glucosidase | - |
| QRE67_RS02335 (QRE67_02330) | - | 462111..463748 (+) | 1638 | WP_286123363.1 | PTS transporter subunit IIBC | - |
| QRE67_RS02340 (QRE67_02335) | - | 463752..464543 (+) | 792 | WP_286123364.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QRE67_RS02345 (QRE67_02340) | - | 464851..467529 (+) | 2679 | WP_286123365.1 | YhgE/Pip domain-containing protein | - |
| QRE67_RS02350 (QRE67_02345) | - | 467699..469573 (-) | 1875 | Protein_397 | DNA topoisomerase III | - |
| QRE67_RS02355 (QRE67_02350) | - | 469714..470961 (+) | 1248 | WP_286123366.1 | site-specific integrase | - |
| QRE67_RS02360 (QRE67_02355) | - | 470939..472891 (+) | 1953 | WP_286123367.1 | helix-turn-helix domain-containing protein | - |
| QRE67_RS02365 (QRE67_02360) | - | 472881..474518 (+) | 1638 | WP_286123368.1 | site-specific integrase | - |
| QRE67_RS02370 (QRE67_02365) | - | 474505..475194 (+) | 690 | WP_286123369.1 | hypothetical protein | - |
| QRE67_RS02375 (QRE67_02370) | - | 475626..477146 (+) | 1521 | WP_286123370.1 | class I SAM-dependent DNA methyltransferase | - |
| QRE67_RS02380 (QRE67_02375) | - | 477136..478401 (+) | 1266 | WP_286123371.1 | restriction endonuclease subunit S | - |
| QRE67_RS02385 (QRE67_02380) | - | 478402..481497 (+) | 3096 | WP_286123372.1 | type I restriction endonuclease subunit R | - |
| QRE67_RS02390 (QRE67_02385) | - | 481901..482131 (-) | 231 | WP_286123373.1 | helix-turn-helix transcriptional regulator | - |
| QRE67_RS02395 (QRE67_02390) | - | 482265..482519 (+) | 255 | WP_242302731.1 | transposase | - |
| QRE67_RS02400 (QRE67_02395) | topB | 482595..484784 (+) | 2190 | WP_286123374.1 | DNA topoisomerase III | - |
| QRE67_RS02405 (QRE67_02400) | - | 484883..485500 (-) | 618 | WP_286123375.1 | hypothetical protein | - |
| QRE67_RS02410 (QRE67_02405) | - | 485530..486735 (-) | 1206 | WP_286123376.1 | response regulator | - |
| QRE67_RS02415 (QRE67_02410) | - | 486737..487198 (-) | 462 | WP_286123377.1 | hypothetical protein | - |
| QRE67_RS02420 (QRE67_02415) | - | 487179..490829 (-) | 3651 | WP_286123378.1 | hypothetical protein | - |
| QRE67_RS02425 (QRE67_02420) | - | 491518..491832 (-) | 315 | Protein_412 | toprim domain-containing protein | - |
| QRE67_RS02430 (QRE67_02425) | ceuB | 492272..493225 (+) | 954 | WP_286123379.1 | ABC transporter permease | Machinery gene |
| QRE67_RS02435 (QRE67_02430) | - | 493215..494186 (+) | 972 | WP_286123380.1 | iron chelate uptake ABC transporter family permease subunit | - |
| QRE67_RS02440 (QRE67_02435) | - | 494180..494938 (+) | 759 | WP_286123381.1 | ABC transporter ATP-binding protein | - |
| QRE67_RS02445 (QRE67_02440) | - | 495171..496118 (+) | 948 | WP_286123382.1 | siderophore ABC transporter substrate-binding protein | - |
| QRE67_RS02450 (QRE67_02445) | thiM | 496409..497218 (+) | 810 | WP_286123383.1 | hydroxyethylthiazole kinase | - |
| QRE67_RS02455 (QRE67_02450) | thiE | 497234..497887 (+) | 654 | WP_286123384.1 | thiamine phosphate synthase | - |
| QRE67_RS02460 (QRE67_02455) | ilvA | 498147..499355 (+) | 1209 | WP_286123385.1 | threonine ammonia-lyase | - |
| QRE67_RS02465 (QRE67_02460) | - | 499440..500753 (-) | 1314 | WP_286123386.1 | anaerobic C4-dicarboxylate transporter | - |
| QRE67_RS02470 (QRE67_02465) | - | 501749..502069 (+) | 321 | WP_286123387.1 | MTH1187 family thiamine-binding protein | - |
| QRE67_RS02475 (QRE67_02470) | - | 502041..502817 (+) | 777 | WP_286123388.1 | ABC transporter permease | - |
| QRE67_RS02480 (QRE67_02475) | - | 502814..503812 (+) | 999 | WP_286123389.1 | ABC transporter substrate-binding protein | - |
| QRE67_RS02485 (QRE67_02480) | - | 503809..504558 (+) | 750 | WP_286123390.1 | ABC transporter ATP-binding protein | - |
| QRE67_RS02490 (QRE67_02485) | - | 504985..506520 (+) | 1536 | WP_286123391.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| QRE67_RS02495 (QRE67_02490) | - | 506934..507746 (+) | 813 | WP_286123392.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35105.40 Da Isoelectric Point: 10.0981
>NTDB_id=846331 QRE67_RS02430 WP_286123379.1 492272..493225(+) (ceuB) [Bacillus sp. DX3.1]
MKKRYLFIMLIVLSIASIFIGVKDIKPIDILHLDQEQVQIVFISRLPRLISIIVAGVSLSISGLIMQQLSRNKFVSPTTA
GTMDSARLGVLVSLMLFTTASPLEKMFVAFVFALAGTFLFMQILKRIKFKDTIFIPLVGIMFGNIISSITTFFAYKYDLI
QNISAWLQGDFSMVMKGRYEILYLSIPLVIIAFLYANRFTVAGMGEDFAANLGMNYNRVLNIGLIIVALISALVVLTVGM
IPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLACDIFGRIIIYPYEISIGLTVGVIGSGIFLYLLMRRNAYAA
MKKRYLFIMLIVLSIASIFIGVKDIKPIDILHLDQEQVQIVFISRLPRLISIIVAGVSLSISGLIMQQLSRNKFVSPTTA
GTMDSARLGVLVSLMLFTTASPLEKMFVAFVFALAGTFLFMQILKRIKFKDTIFIPLVGIMFGNIISSITTFFAYKYDLI
QNISAWLQGDFSMVMKGRYEILYLSIPLVIIAFLYANRFTVAGMGEDFAANLGMNYNRVLNIGLIIVALISALVVLTVGM
IPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLACDIFGRIIIYPYEISIGLTVGVIGSGIFLYLLMRRNAYAA
Nucleotide
Download Length: 954 bp
>NTDB_id=846331 QRE67_RS02430 WP_286123379.1 492272..493225(+) (ceuB) [Bacillus sp. DX3.1]
ATGAAAAAAAGATATTTGTTTATCATGCTTATTGTTTTATCAATTGCGTCTATTTTTATCGGTGTAAAAGATATAAAACC
GATAGATATTTTGCACTTAGATCAAGAACAAGTGCAAATCGTATTTATCAGTAGGCTGCCACGCTTGATCAGCATTATTG
TTGCAGGAGTGAGTTTGAGTATAAGTGGCTTAATTATGCAGCAGCTGAGCAGAAATAAATTTGTATCTCCGACAACTGCG
GGGACGATGGATAGTGCGAGATTAGGAGTTTTAGTCTCATTGATGCTATTCACAACAGCGAGTCCGCTTGAAAAAATGTT
TGTTGCATTTGTTTTTGCGTTAGCTGGCACATTTTTATTTATGCAAATTTTGAAGAGAATTAAGTTTAAGGATACGATTT
TTATTCCACTTGTCGGGATTATGTTTGGGAATATTATCAGTTCTATTACGACATTCTTTGCTTATAAATACGACTTAATT
CAAAACATTTCTGCATGGCTACAAGGAGACTTTTCAATGGTTATGAAAGGAAGATATGAGATTTTATACTTGAGCATTCC
GCTTGTAATCATTGCATTTTTATATGCAAACAGATTTACAGTTGCCGGAATGGGAGAGGATTTTGCAGCGAACTTAGGGA
TGAATTACAATCGAGTGTTAAATATCGGCCTAATTATCGTTGCGTTAATCTCAGCATTGGTTGTCTTGACTGTCGGAATG
ATTCCATTTTTAGGACTTATTATCCCGAATATCGTTTCGATTTATCGCGGGGATAACTTAAAGAATAGTTTACCTCATAC
AGCCTTACTAGGGGCAGTTTTTGTCCTGGCTTGCGATATATTTGGACGTATCATTATTTATCCGTATGAGATTTCCATTG
GCCTTACAGTCGGTGTCATTGGAAGCGGAATCTTCCTTTATTTATTGATGAGGAGAAACGCGTATGCAGCATAG
ATGAAAAAAAGATATTTGTTTATCATGCTTATTGTTTTATCAATTGCGTCTATTTTTATCGGTGTAAAAGATATAAAACC
GATAGATATTTTGCACTTAGATCAAGAACAAGTGCAAATCGTATTTATCAGTAGGCTGCCACGCTTGATCAGCATTATTG
TTGCAGGAGTGAGTTTGAGTATAAGTGGCTTAATTATGCAGCAGCTGAGCAGAAATAAATTTGTATCTCCGACAACTGCG
GGGACGATGGATAGTGCGAGATTAGGAGTTTTAGTCTCATTGATGCTATTCACAACAGCGAGTCCGCTTGAAAAAATGTT
TGTTGCATTTGTTTTTGCGTTAGCTGGCACATTTTTATTTATGCAAATTTTGAAGAGAATTAAGTTTAAGGATACGATTT
TTATTCCACTTGTCGGGATTATGTTTGGGAATATTATCAGTTCTATTACGACATTCTTTGCTTATAAATACGACTTAATT
CAAAACATTTCTGCATGGCTACAAGGAGACTTTTCAATGGTTATGAAAGGAAGATATGAGATTTTATACTTGAGCATTCC
GCTTGTAATCATTGCATTTTTATATGCAAACAGATTTACAGTTGCCGGAATGGGAGAGGATTTTGCAGCGAACTTAGGGA
TGAATTACAATCGAGTGTTAAATATCGGCCTAATTATCGTTGCGTTAATCTCAGCATTGGTTGTCTTGACTGTCGGAATG
ATTCCATTTTTAGGACTTATTATCCCGAATATCGTTTCGATTTATCGCGGGGATAACTTAAAGAATAGTTTACCTCATAC
AGCCTTACTAGGGGCAGTTTTTGTCCTGGCTTGCGATATATTTGGACGTATCATTATTTATCCGTATGAGATTTCCATTG
GCCTTACAGTCGGTGTCATTGGAAGCGGAATCTTCCTTTATTTATTGATGAGGAGAAACGCGTATGCAGCATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
54.952 |
98.738 |
0.543 |