Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRE62_RS24695 Genome accession   NZ_CP128149
Coordinates   4112933..4113727 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain SIN3.2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4107933..4118727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRE62_RS24670 (QRE62_24665) - 4108411..4110483 (-) 2073 WP_199662387.1 sigma-54-dependent Fis family transcriptional regulator -
  QRE62_RS24675 (QRE62_24670) - 4110621..4110854 (+) 234 WP_001190193.1 DUF2627 domain-containing protein -
  QRE62_RS24680 (QRE62_24675) - 4110906..4111634 (-) 729 WP_002033957.1 glycerophosphodiester phosphodiesterase -
  QRE62_RS24685 (QRE62_24680) - 4111685..4111831 (+) 147 WP_001247671.1 YycC family protein -
  QRE62_RS24690 (QRE62_24685) - 4112072..4112635 (-) 564 WP_286126194.1 PRK06770 family protein -
  QRE62_RS24695 (QRE62_24690) spo0A 4112933..4113727 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  QRE62_RS24700 (QRE62_24695) spoIVB 4114014..4115306 (-) 1293 WP_002129041.1 SpoIVB peptidase -
  QRE62_RS24705 (QRE62_24700) recN 4115426..4117165 (-) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  QRE62_RS24710 (QRE62_24705) argR 4117436..4117885 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=846254 QRE62_RS24695 WP_002015081.1 4112933..4113727(-) (spo0A) [Bacillus mycoides strain SIN3.2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=846254 QRE62_RS24695 WP_002015081.1 4112933..4113727(-) (spo0A) [Bacillus mycoides strain SIN3.2]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGTTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818