Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QRD90_RS06325 Genome accession   NZ_CP128118
Coordinates   1296946..1297128 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain LN4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1291946..1302128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD90_RS06310 (QRD90_06315) - 1294579..1294770 (-) 192 WP_048686917.1 YjzD family protein -
  QRD90_RS06315 (QRD90_06320) - 1295065..1295787 (+) 723 WP_048686919.1 alpha/beta hydrolase -
  QRD90_RS06320 (QRD90_06325) - 1295890..1296723 (+) 834 WP_053534135.1 hypothetical protein -
  QRD90_RS06325 (QRD90_06330) comZ 1296946..1297128 (+) 183 WP_034314525.1 ComZ family protein Regulator
  QRD90_RS06330 (QRD90_06335) - 1297171..1297392 (-) 222 WP_252297481.1 hypothetical protein -
  QRD90_RS06335 (QRD90_06340) - 1297595..1298530 (+) 936 WP_053534137.1 beta-ketoacyl-ACP synthase III -
  QRD90_RS06340 (QRD90_06345) fabF 1298581..1299819 (+) 1239 WP_053534138.1 beta-ketoacyl-ACP synthase II -
  QRD90_RS06345 (QRD90_06350) - 1299843..1300709 (+) 867 WP_234014070.1 DUF2268 domain-containing putative Zn-dependent protease -
  QRD90_RS06350 (QRD90_06355) - 1300824..1301579 (+) 756 WP_053534140.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=846086 QRD90_RS06325 WP_034314525.1 1296946..1297128(+) (comZ) [Peribacillus frigoritolerans strain LN4]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=846086 QRD90_RS06325 WP_034314525.1 1296946..1297128(+) (comZ) [Peribacillus frigoritolerans strain LN4]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633