Detailed information NTG0846069

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QRD86_RS19705
• Genome accession: NZ_CP128116
• Coordinates: 3741710..3742855 (+)
• Length: 381 a.a.
• NCBI ID: WP_188323349.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain KF17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3736710..3747855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRD86_RS19685 (QRD86_19680)	-	3737585..3738862 (+)	1278	WP_127696379.1	pitrilysin family protein	-
QRD86_RS19690 (QRD86_19685)	-	3738859..3739560 (+)	702	WP_151174591.1	bacteriocin biosynthesis protein AlbG	-
QRD86_RS19695 (QRD86_19690)	-	3739567..3739923 (-)	357	Protein_3719	YncE family protein	-
QRD86_RS19700 (QRD86_19695)	-	3740123..3741481 (-)	1359	WP_106019735.1	YncE family protein	-
QRD86_RS19705 (QRD86_19700)	rapF	3741710..3742855 (+)	1146	WP_188323349.1	tetratricopeptide repeat protein	Regulator
QRD86_RS19710 (QRD86_19705)	phrF	3742839..3742958 (+)	120	WP_010332289.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QRD86_RS19715 (QRD86_19710)	-	3743211..3743690 (+)	480	WP_061572213.1	hypothetical protein	-
QRD86_RS19720 (QRD86_19715)	-	3743839..3744627 (+)	789	WP_188323350.1	hypothetical protein	-
QRD86_RS19725 (QRD86_19720)	-	3744614..3745288 (+)	675	WP_188323351.1	hypothetical protein	-
QRD86_RS19730 (QRD86_19725)	-	3745298..3746095 (+)	798	WP_223203941.1	hypothetical protein	-
QRD86_RS19735 (QRD86_19730)	-	3746098..3746745 (+)	648	WP_188323353.1	ABC transporter ATP-binding protein	-
QRD86_RS19740 (QRD86_19735)	-	3746738..3747298 (+)	561	WP_188323354.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45678.17 Da
• Isoelectric Point: 5.2567

>NTDB_id=846069 QRD86_RS19705 WP_188323349.1 3741710..3742855(+) (rapF) [Bacillus halotolerans strain KF17]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHTAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYTMAESEKQPQLMGRTLYNIGLCKNSQEQYES
AITYFKRAISVFEEANILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGIAYSKEAGDIIYLSEFEFLKSLYLSGPDEEAI
QTFFDFLESKMMYADLEDFALDVAKYYHGRENFQKASAYFLKVERVRQLIQGGVKLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=846069 QRD86_RS19705 WP_188323349.1 3741710..3742855(+) (rapF) [Bacillus halotolerans strain KF17]
GTGACAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
AGATGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCACGA
CTGTCCGATTTGCTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGAGTCCTTGATTATTACTTTAATTTTTTCAG
GGGCATGTACGAACTGGACCAGCGGGAGTACTTGTCTGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATTTTTG
TAAAGGATCGAATAGAAAAAGCTGAGTTTTTCTTTAAAATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCC
ATGGACTATGCACGGCAGGCATATGAAATATATAAAGAGCACACGGCATATAATATTAGATTGCTTCAATGTCATTCTTT
GTTTGCTACCAATTTCTTAGATCTCAAGCAATATGAGGACGCCATATCACATTTCAAAAAAGCTTATACAATGGCTGAAT
CCGAAAAACAGCCCCAATTAATGGGAAGAACGCTGTACAACATTGGGCTTTGCAAAAACAGCCAAGAGCAGTATGAGTCA
GCAATCACATATTTCAAAAGAGCCATATCCGTTTTTGAAGAAGCTAACATTCTTCCTTCTCTGCCACAAGCTTATTTTTT
GATTACACAAATTCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAAGGAATTGCTTACTCTAAAG
AGGCCGGAGATATCATATACTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCTGGCCCGGATGAAGAGGCAATT
CAAACATTCTTCGATTTTCTCGAAAGTAAAATGATGTATGCTGATCTTGAAGATTTTGCGCTTGATGTGGCAAAATATTA
TCATGGACGTGAAAATTTCCAAAAAGCTTCCGCGTATTTTCTGAAGGTGGAACGAGTAAGACAGCTTATTCAAGGAGGAG
TGAAATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	93.176	100	0.932
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572