Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QRD86_RS06775 Genome accession   NZ_CP128116
Coordinates   1225445..1225636 (+) Length   63 a.a.
NCBI ID   WP_127695478.1    Uniprot ID   -
Organism   Bacillus halotolerans strain KF17     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1220445..1230636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD86_RS06745 (QRD86_06745) argF 1221276..1222232 (+) 957 WP_024120900.1 ornithine carbamoyltransferase -
  QRD86_RS06750 (QRD86_06750) - 1222334..1222513 (+) 180 WP_003239319.1 YjzC family protein -
  QRD86_RS06755 (QRD86_06755) - 1222559..1222744 (-) 186 WP_010333727.1 YjzD family protein -
  QRD86_RS06760 (QRD86_06760) - 1223003..1223740 (+) 738 WP_024120901.1 hypothetical protein -
  QRD86_RS06765 (QRD86_06765) - 1223823..1224386 (+) 564 WP_106022355.1 hypothetical protein -
  QRD86_RS06770 (QRD86_06770) med 1224477..1225430 (+) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  QRD86_RS06775 (QRD86_06775) comZ 1225445..1225636 (+) 192 WP_127695478.1 ComG operon transcriptional repressor ComZ Regulator
  QRD86_RS06780 (QRD86_06780) - 1225666..1225896 (-) 231 WP_081638273.1 hypothetical protein -
  QRD86_RS06785 (QRD86_06785) fabH 1226062..1227000 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  QRD86_RS06790 (QRD86_06790) fabF 1227023..1228261 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  QRD86_RS06795 (QRD86_06795) - 1228341..1229126 (+) 786 WP_127695474.1 DUF2268 domain-containing protein -
  QRD86_RS06800 (QRD86_06800) appD 1229316..1230302 (+) 987 WP_127695472.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7244.30 Da        Isoelectric Point: 4.2564

>NTDB_id=846016 QRD86_RS06775 WP_127695478.1 1225445..1225636(+) (comZ) [Bacillus halotolerans strain KF17]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMTEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=846016 QRD86_RS06775 WP_127695478.1 1225445..1225636(+) (comZ) [Bacillus halotolerans strain KF17]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGACGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984