Detailed information NTG0845948

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QRD88_RS05590
• Genome accession: NZ_CP128114
• Coordinates: 1107545..1108507 (+)
• Length: 320 a.a.
• NCBI ID: WP_125586506.1
• Uniprot ID: -
• Organism: Bacillus safensis strain G6S3
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1102545..1113507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRD88_RS05560 (QRD88_05555)	argF	1102884..1103834 (+)	951	WP_041110110.1	ornithine carbamoyltransferase	-
QRD88_RS05565 (QRD88_05560)	-	1103937..1104116 (+)	180	WP_008348517.1	YjzC family protein	-
QRD88_RS05570 (QRD88_05565)	-	1104280..1105545 (+)	1266	WP_034282089.1	MFS transporter	-
QRD88_RS05575 (QRD88_05570)	-	1105657..1105851 (-)	195	WP_003211779.1	YjzD family protein	-
QRD88_RS05580 (QRD88_05575)	-	1106064..1106804 (+)	741	WP_280149685.1	hypothetical protein	-
QRD88_RS05585 (QRD88_05580)	-	1106878..1107453 (+)	576	WP_286099034.1	nad binding enzyme	-
QRD88_RS05590 (QRD88_05585)	med	1107545..1108507 (+)	963	WP_125586506.1	BMP family ABC transporter substrate-binding protein	Regulator
QRD88_RS05595 (QRD88_05590)	comZ	1108520..1108717 (+)	198	WP_024425054.1	ComZ family protein	Regulator
QRD88_RS05600 (QRD88_05595)	-	1108728..1108961 (-)	234	WP_024426489.1	hypothetical protein	-
QRD88_RS05605 (QRD88_05600)	-	1109133..1110071 (+)	939	WP_024425052.1	beta-ketoacyl-ACP synthase III	-
QRD88_RS05610 (QRD88_05605)	fabF	1110093..1111334 (+)	1242	WP_286099035.1	beta-ketoacyl-ACP synthase II	-
QRD88_RS05615 (QRD88_05610)	-	1111412..1112215 (+)	804	WP_024425050.1	DUF2268 domain-containing protein	-
QRD88_RS05620 (QRD88_05615)	-	1112363..1113343 (+)	981	WP_025093401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35669.50 Da
• Isoelectric Point: 5.0003

>NTDB_id=845948 QRD88_RS05590 WP_125586506.1 1107545..1108507(+) (med) [Bacillus safensis strain G6S3]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTSKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=845948 QRD88_RS05590 WP_125586506.1 1107545..1108507(+) (med) [Bacillus safensis strain G6S3]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTATAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAAGTAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.217	97.813	0.628