Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QRD88_RS04220 Genome accession   NZ_CP128114
Coordinates   847669..848460 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain G6S3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 842669..853460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD88_RS04185 (QRD88_04180) - 842752..843300 (+) 549 WP_103132713.1 thioredoxin family protein -
  QRD88_RS04190 (QRD88_04185) - 843634..844101 (+) 468 WP_024425226.1 DUF393 domain-containing protein -
  QRD88_RS04195 (QRD88_04190) - 844138..845394 (-) 1257 WP_286098997.1 transcriptional regulator -
  QRD88_RS04200 (QRD88_04195) - 845672..846259 (+) 588 WP_103132712.1 nitroreductase -
  QRD88_RS04205 (QRD88_04200) - 846298..846453 (-) 156 WP_024425223.1 YfhD family protein -
  QRD88_RS04210 (QRD88_04205) - 846515..846625 (-) 111 WP_017358836.1 YfhE family protein -
  QRD88_RS04215 (QRD88_04210) - 846678..847574 (-) 897 WP_103132711.1 TIGR01777 family oxidoreductase -
  QRD88_RS04220 (QRD88_04215) recX 847669..848460 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  QRD88_RS04225 (QRD88_04220) - 848464..848778 (+) 315 WP_103132710.1 YfhH family protein -
  QRD88_RS04230 (QRD88_04225) - 848802..848975 (-) 174 WP_008360604.1 YpzG family protein -
  QRD88_RS04235 (QRD88_04230) - 849001..849150 (-) 150 WP_213405163.1 small, acid-soluble spore protein K -
  QRD88_RS04240 (QRD88_04235) - 849267..849539 (+) 273 WP_122632173.1 YfhJ family protein -
  QRD88_RS04245 (QRD88_04240) - 849839..850822 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=845940 QRD88_RS04220 WP_024425808.1 847669..848460(+) (recX) [Bacillus safensis strain G6S3]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=845940 QRD88_RS04220 WP_024425808.1 847669..848460(+) (recX) [Bacillus safensis strain G6S3]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCATGATTTGAAAAAAGGAAAAGAGCTCGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGCAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCCCAATACCCTGATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAACCGTTCTGCAAAAGAGATTGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTTGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTGTTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639