Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QRD87_RS07595 Genome accession   NZ_CP128109
Coordinates   1453681..1454262 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain D9_B_49     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448681..1459262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD87_RS07570 (QRD87_07570) - 1449359..1450537 (+) 1179 WP_048001606.1 N-acetyldiaminopimelate deacetylase -
  QRD87_RS07575 (QRD87_07575) - 1450588..1450830 (+) 243 WP_003211408.1 YkuS family protein -
  QRD87_RS07580 (QRD87_07580) - 1450853..1451662 (-) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  QRD87_RS07585 (QRD87_07585) ahpA 1451934..1452476 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  QRD87_RS07590 (QRD87_07590) - 1452741..1453199 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  QRD87_RS07595 (QRD87_07595) rok 1453681..1454262 (+) 582 WP_007498648.1 hypothetical protein Regulator
  QRD87_RS07600 (QRD87_07600) - 1454325..1455242 (-) 918 WP_286108844.1 sigmaE regulated sporulation protein -
  QRD87_RS07605 (QRD87_07605) - 1455326..1455907 (+) 582 WP_286108845.1 molybdenum cofactor guanylyltransferase -
  QRD87_RS07610 (QRD87_07610) - 1455937..1456953 (+) 1017 WP_286108846.1 ThiF family adenylyltransferase -
  QRD87_RS07615 (QRD87_07615) glp 1456963..1458237 (+) 1275 WP_286108847.1 gephyrin-like molybdotransferase Glp -
  QRD87_RS07620 (QRD87_07620) mobB 1458219..1458746 (+) 528 WP_286108848.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QRD87_RS07625 (QRD87_07625) - 1458739..1459230 (+) 492 WP_286108849.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=845844 QRD87_RS07595 WP_007498648.1 1453681..1454262(+) (rok) [Bacillus altitudinis strain D9_B_49]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=845844 QRD87_RS07595 WP_007498648.1 1453681..1454262(+) (rok) [Bacillus altitudinis strain D9_B_49]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782