Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QRD87_RS07470 Genome accession   NZ_CP128109
Coordinates   1433666..1434127 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain D9_B_49     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1428666..1439127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD87_RS07445 (QRD87_07445) - 1429272..1430156 (+) 885 WP_056704830.1 cation diffusion facilitator family transporter -
  QRD87_RS07450 (QRD87_07450) - 1430220..1430372 (-) 153 WP_017367142.1 hypothetical protein -
  QRD87_RS07455 (QRD87_07455) - 1430673..1431212 (+) 540 WP_039169112.1 RDD family protein -
  QRD87_RS07460 (QRD87_07460) - 1431338..1432648 (+) 1311 WP_173407971.1 MFS transporter -
  QRD87_RS07465 (QRD87_07465) - 1432722..1433630 (+) 909 WP_024719666.1 chemotaxis protein -
  QRD87_RS07470 (QRD87_07470) kre 1433666..1434127 (-) 462 WP_007498684.1 YkyB family protein Regulator
  QRD87_RS07475 (QRD87_07475) - 1434605..1434820 (-) 216 WP_058337408.1 hypothetical protein -
  QRD87_RS07480 (QRD87_07480) - 1434986..1435162 (+) 177 WP_173407972.1 hypothetical protein -
  QRD87_RS07485 (QRD87_07485) - 1435289..1436644 (+) 1356 WP_061417609.1 IS1182 family transposase -
  QRD87_RS07490 (QRD87_07490) - 1436760..1438037 (-) 1278 WP_008348012.1 MFS transporter -
  QRD87_RS07495 (QRD87_07495) - 1438111..1438608 (-) 498 WP_024719572.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=845843 QRD87_RS07470 WP_007498684.1 1433666..1434127(-) (kre) [Bacillus altitudinis strain D9_B_49]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=845843 QRD87_RS07470 WP_007498684.1 1433666..1434127(-) (kre) [Bacillus altitudinis strain D9_B_49]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATTCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771