Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QRD87_RS05720 Genome accession   NZ_CP128109
Coordinates   1104026..1104976 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain D9_B_49     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1099026..1109976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRD87_RS05700 (QRD87_05700) - 1100260..1100742 (+) 483 WP_073415935.1 hypothetical protein -
  QRD87_RS05705 (QRD87_05705) - 1100774..1102213 (-) 1440 WP_286108807.1 PLP-dependent aminotransferase family protein -
  QRD87_RS05710 (QRD87_05710) - 1102356..1103525 (+) 1170 WP_286108808.1 MFS transporter -
  QRD87_RS05715 (QRD87_05715) - 1103587..1103865 (+) 279 WP_286108809.1 barstar family protein -
  QRD87_RS05720 (QRD87_05720) ceuB 1104026..1104976 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  QRD87_RS05725 (QRD87_05725) - 1104969..1105919 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  QRD87_RS05730 (QRD87_05730) - 1105910..1106668 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  QRD87_RS05735 (QRD87_05735) - 1106691..1107635 (+) 945 WP_286108810.1 siderophore ABC transporter substrate-binding protein -
  QRD87_RS05740 (QRD87_05740) - 1107775..1108731 (+) 957 WP_072368152.1 LCP family protein -
  QRD87_RS05745 (QRD87_05745) - 1108964..1109398 (-) 435 WP_039167431.1 hypothetical protein -
  QRD87_RS05750 (QRD87_05750) - 1109484..1109846 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=845831 QRD87_RS05720 WP_017366964.1 1104026..1104976(+) (ceuB) [Bacillus altitudinis strain D9_B_49]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=845831 QRD87_RS05720 WP_017366964.1 1104026..1104976(+) (ceuB) [Bacillus altitudinis strain D9_B_49]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTTTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGTGATCACTTGAAAAAAAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494