Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   QRY07_RS21680 Genome accession   NZ_CP128107
Coordinates   4071417..4072163 (-) Length   248 a.a.
NCBI ID   WP_002199331.1    Uniprot ID   J7XT79
Organism   Bacillus cereus strain D5_B_69     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 4066417..4077163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY07_RS21660 (QRY07_21665) dnaG 4067147..4068949 (-) 1803 WP_002067179.1 DNA primase -
  QRY07_RS21665 (QRY07_21670) - 4069150..4069443 (-) 294 WP_002111881.1 DUF188 domain-containing protein -
  QRY07_RS21670 (QRY07_21675) - 4069836..4070648 (-) 813 WP_002199332.1 pyruvate, water dikinase regulatory protein -
  QRY07_RS21675 (QRY07_21680) - 4070678..4071310 (-) 633 WP_087945800.1 helix-turn-helix transcriptional regulator -
  QRY07_RS21680 (QRY07_21685) recO 4071417..4072163 (-) 747 WP_002199331.1 DNA repair protein RecO Machinery gene
  QRY07_RS21685 (QRY07_21690) - 4072197..4072340 (-) 144 WP_000883924.1 YqzL family protein -
  QRY07_RS21690 (QRY07_21695) era 4072517..4073422 (-) 906 WP_002122584.1 GTPase Era -
  QRY07_RS21695 (QRY07_21700) - 4073415..4073813 (-) 399 WP_002111886.1 cytidine deaminase -
  QRY07_RS21700 (QRY07_21705) - 4073913..4074266 (-) 354 WP_002199329.1 diacylglycerol kinase family protein -
  QRY07_RS21705 (QRY07_21710) ybeY 4074263..4074733 (-) 471 WP_002199328.1 rRNA maturation RNase YbeY -
  QRY07_RS21710 (QRY07_21715) - 4074730..4076874 (-) 2145 WP_002199327.1 HD family phosphohydrolase -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 28616.18 Da        Isoelectric Point: 8.3250

>NTDB_id=845802 QRY07_RS21680 WP_002199331.1 4071417..4072163(-) (recO) [Bacillus cereus strain D5_B_69]
MFQKVEGIVIRTTDYGETNKIVTIYSREFGKVSAMARGAKKPKSRLAAISQLMTHGHFLIQIGSGLGTLQQGEIISSMKE
IRKDIFLTAYASFIIELTDKATEDKKHNPYLFEMLYQTLHYMCEGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETD
FVAFSVREGGFLCSRHAEQDPYRIPVGEAVHKLLRLFFHFDLHRLGNVSVKDSTKKQMRTVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Nucleotide


Download         Length: 747 bp        

>NTDB_id=845802 QRY07_RS21680 WP_002199331.1 4071417..4072163(-) (recO) [Bacillus cereus strain D5_B_69]
ATGTTTCAAAAAGTTGAGGGCATTGTCATCCGTACAACAGATTACGGAGAAACAAATAAGATTGTTACAATATACTCACG
GGAATTTGGTAAGGTAAGTGCAATGGCAAGAGGGGCGAAAAAACCGAAGAGTCGGTTAGCGGCTATTTCGCAACTTATGA
CACATGGTCATTTTCTTATTCAAATTGGATCTGGACTTGGAACTTTGCAACAAGGCGAGATTATTTCATCTATGAAAGAA
ATTCGCAAGGATATATTTTTAACTGCTTATGCATCATTTATTATCGAATTAACTGATAAAGCAACAGAAGATAAGAAGCA
TAATCCGTATTTATTTGAAATGTTATATCAAACGTTGCATTATATGTGTGAGGGTGTTGATCCAGAAGTATTATCATTAA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCACCCGTACTTTGATACATGTGCTATTTGTCATCAAGAAACAGAT
TTTGTCGCCTTCTCTGTCAGGGAAGGCGGTTTTCTGTGCTCGCGTCATGCGGAGCAAGATCCGTATCGTATTCCGGTGGG
AGAGGCTGTTCATAAATTATTACGTCTCTTTTTTCACTTCGATCTACACCGGCTCGGTAATGTATCGGTGAAGGATAGTA
CAAAAAAACAAATGCGCACAGTATTGAATACATATTATGATGAATATTGTGGGATTTATTTGAAATCAAGGCGTTTCCTG
GAACAACTTGATAAGTTTCAAATATAA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(82-238)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7XT79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

55.466

99.597

0.552