Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   V2176_RS19855 Genome accession   NZ_CP143963
Coordinates   3834925..3835773 (-) Length   282 a.a.
NCBI ID   WP_330938000.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FUA2151     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3829925..3840773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2176_RS19820 (V2176_19820) rpsR 3830130..3830369 (-) 240 WP_003178022.1 30S ribosomal protein S18 -
  V2176_RS19825 (V2176_19825) ssbA 3830421..3830933 (-) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  V2176_RS19830 (V2176_19830) rpsF 3830980..3831267 (-) 288 WP_003178026.1 30S ribosomal protein S6 -
  V2176_RS19835 (V2176_19835) ychF 3831381..3832481 (-) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  V2176_RS19840 (V2176_19840) - 3832660..3832866 (-) 207 WP_011201785.1 DUF951 domain-containing protein -
  V2176_RS19845 (V2176_19845) - 3832954..3833967 (-) 1014 WP_003178030.1 hypothetical protein -
  V2176_RS19850 (V2176_19850) yyaC 3834271..3834888 (+) 618 WP_003178032.1 spore protease YyaC -
  V2176_RS19855 (V2176_19855) spo0J 3834925..3835773 (-) 849 WP_330938000.1 ParB/RepB/Spo0J family partition protein Regulator
  V2176_RS19860 (V2176_19860) soj 3835766..3836527 (-) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  V2176_RS19865 (V2176_19865) - 3836770..3837213 (-) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  V2176_RS19870 (V2176_19870) - 3837280..3838137 (-) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  V2176_RS19875 (V2176_19875) noc 3838193..3839044 (-) 852 WP_003178042.1 nucleoid occlusion protein -
  V2176_RS19880 (V2176_19880) rsmG 3839142..3839861 (-) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32309.50 Da        Isoelectric Point: 9.5628

>NTDB_id=845798 V2176_RS19855 WP_330938000.1 3834925..3835773(-) (spo0J) [Bacillus licheniformis strain FUA2151]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLLMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=845798 V2176_RS19855 WP_330938000.1 3834925..3835773(-) (spo0J) [Bacillus licheniformis strain FUA2151]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATTGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.077

92.199

0.397