Detailed information NTG0845737

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: V2176_RS10890
• Genome accession: NZ_CP143963
• Coordinates: 2082891..2084021 (-)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain FUA2151
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2077891..2089021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2176_RS10870 (V2176_10870)	-	2079080..2079424 (-)	345	WP_003183123.1	hypothetical protein	-
V2176_RS10875 (V2176_10875)	-	2079687..2081873 (-)	2187	WP_011198084.1	RNA ligase	-
V2176_RS10880 (V2176_10880)	-	2082000..2082437 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
V2176_RS10885 (V2176_10885)	-	2082596..2082901 (-)	306	WP_003183128.1	hypothetical protein	-
V2176_RS10890 (V2176_10890)	rapC	2082891..2084021 (-)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
V2176_RS10895 (V2176_10895)	-	2084253..2084690 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
V2176_RS10900 (V2176_10900)	-	2084820..2085923 (+)	1104	WP_414017838.1	DUF1002 domain-containing protein	-
V2176_RS10905 (V2176_10905)	-	2085920..2086780 (-)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
V2176_RS10910 (V2176_10910)	lysA	2087019..2088338 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=845737 V2176_RS10890 WP_009327959.1 2082891..2084021(-) (rapC) [Bacillus licheniformis strain FUA2151]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=845737 V2176_RS10890 WP_009327959.1 2082891..2084021(-) (rapC) [Bacillus licheniformis strain FUA2151]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTTGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452