Detailed information NTG0845679

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: V2176_RS03380
• Genome accession: NZ_CP143963
• Coordinates: 670170..671288 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FUA2151
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 665170..676288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2176_RS03355 (V2176_03355)	-	665370..666875 (+)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-
V2176_RS03360 (V2176_03360)	-	666957..668168 (-)	1212	WP_003180218.1	cation:proton antiporter	-
V2176_RS03365 (V2176_03365)	-	668175..668672 (-)	498	WP_330938102.1	cation:proton antiporter regulatory subunit	-
V2176_RS03370 (V2176_03370)	-	668737..669066 (-)	330	WP_016886161.1	hypothetical protein	-
V2176_RS03375 (V2176_03375)	-	669267..670043 (+)	777	WP_330938103.1	enoyl-CoA hydratase	-
V2176_RS03380 (V2176_03380)	rapC	670170..671288 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
V2176_RS03385 (V2176_03385)	-	671278..671415 (+)	138	WP_016886158.1	hypothetical protein	-
V2176_RS03390 (V2176_03390)	-	671420..671698 (+)	279	WP_003180226.1	hypothetical protein	-
V2176_RS03395 (V2176_03395)	-	671773..671958 (-)	186	WP_003180228.1	YhzD family protein	-
V2176_RS03400 (V2176_03400)	-	672076..672972 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
V2176_RS03405 (V2176_03405)	-	672965..674233 (+)	1269	WP_330938104.1	ABC transporter permease	-
V2176_RS03410 (V2176_03410)	-	674353..675579 (+)	1227	WP_330938105.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=845679 V2176_RS03380 WP_009328956.1 670170..671288(+) (rapC) [Bacillus licheniformis strain FUA2151]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=845679 V2176_RS03380 WP_009328956.1 670170..671288(+) (rapC) [Bacillus licheniformis strain FUA2151]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374