Detailed information NTG0084563

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JQN54_RS02270
• Genome accession: NZ_AP024305
• Coordinates: 414019..414933 (-)
• Length: 304 a.a.
• NCBI ID: WP_011227933.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HB5008
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 409019..419933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQN54_RS02240 (TthHB5008_04420)	hisH	409649..410245 (+)	597	WP_024119973.1	imidazole glycerol phosphate synthase subunit HisH	-
JQN54_RS02245 (TthHB5008_04430)	-	410216..411136 (-)	921	WP_011172520.1	carbohydrate kinase family protein	-
JQN54_RS02250 (TthHB5008_04440)	guaB	411281..412762 (+)	1482	WP_011227931.1	IMP dehydrogenase	-
JQN54_RS02255 (TthHB5008_04450)	-	412759..412989 (-)	231	WP_011172522.1	hypothetical protein	-
JQN54_RS02260 (TthHB5008_04460)	-	413030..413515 (+)	486	WP_203971633.1	hypothetical protein	-
JQN54_RS02265 (TthHB5008_04470)	-	413460..413885 (-)	426	WP_203971635.1	disulfide bond formation protein B	-
JQN54_RS02270 (TthHB5008_04480)	pilA	414019..414933 (-)	915	WP_011227933.1	signal recognition particle-docking protein FtsY	Machinery gene
JQN54_RS02275 (TthHB5008_04490)	-	414933..415373 (-)	441	WP_024119322.1	hypothetical protein	-
JQN54_RS02280 (TthHB5008_04500)	gltX	415390..416796 (-)	1407	WP_203971639.1	glutamate--tRNA ligase	-
JQN54_RS02285 (TthHB5008_04510)	lptB	416851..417579 (+)	729	WP_011172528.1	LPS export ABC transporter ATP-binding protein	-
JQN54_RS11700 (TthHB5008_04520)	-	417582..418925 (+)	1344	WP_259331156.1	DUF3084 domain-containing protein	-
JQN54_RS11705	prmC	418827..419720 (-)	894	Protein_441	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32721.17 Da
• Isoelectric Point: 9.7124

>NTDB_id=84563 JQN54_RS02270 WP_011227933.1 414019..414933(-) (pilA) [Thermus thermophilus strain HB5008]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=84563 JQN54_RS02270 WP_011227933.1 414019..414933(-) (pilA) [Thermus thermophilus strain HB5008]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTCGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCCGAGGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAGAACGGCCTGGAGCAGGCC
AAGCGCTTCCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.726	100	0.503