Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   VXF94_RS10665 Genome accession   NZ_CP143956
Coordinates   2093504..2094331 (-) Length   275 a.a.
NCBI ID   WP_013350747.1    Uniprot ID   A0A9P1JDV1
Organism   Bacillus amyloliquefaciens strain Fad 108     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2088504..2099331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VXF94_RS10640 (VXF94_10640) abrB 2090844..2091134 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  VXF94_RS10645 (VXF94_10645) rsmI 2091184..2092065 (-) 882 WP_013350751.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  VXF94_RS10650 (VXF94_10650) - 2092040..2092339 (-) 300 WP_013350750.1 GIY-YIG nuclease family protein -
  VXF94_RS10655 (VXF94_10655) - 2092326..2093069 (-) 744 WP_013350749.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  VXF94_RS10660 (VXF94_10660) yabA 2093130..2093489 (-) 360 WP_013350748.1 replication initiation-control protein YabA -
  VXF94_RS10665 (VXF94_10665) yaaT 2093504..2094331 (-) 828 WP_013350747.1 competence/sporulation regulator complex protein RicT Regulator
  VXF94_RS10670 (VXF94_10670) holB 2094334..2095323 (-) 990 WP_013350746.1 DNA polymerase III subunit delta' -
  VXF94_RS10675 (VXF94_10675) - 2095335..2095775 (-) 441 WP_013350745.1 YaaR family protein -
  VXF94_RS10680 (VXF94_10680) darA 2095788..2096117 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  VXF94_RS10685 (VXF94_10685) tmk 2096188..2096826 (-) 639 WP_013350744.1 dTMP kinase -
  VXF94_RS10690 (VXF94_10690) - 2096823..2098256 (-) 1434 WP_013350743.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31174.96 Da        Isoelectric Point: 4.6504

>NTDB_id=845596 VXF94_RS10665 WP_013350747.1 2093504..2094331(-) (yaaT) [Bacillus amyloliquefaciens strain Fad 108]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=845596 VXF94_RS10665 WP_013350747.1 2093504..2094331(-) (yaaT) [Bacillus amyloliquefaciens strain Fad 108]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
GGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGACAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAAGTCATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAA
GAGGCCCTGTCCGCTTTTGAAATCTGTCAGAAAAAAGTGGCTGATCACGGCTTAGATATGAAACTGGTTGATGTTGAGTT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTCACAGCCGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACAAGAATCGAATTGCGTCAAATCGGTGTGAGAGACGAAGCGAAAATGCTCGGCGGTATCGGCCCG
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGACCAAAATTT
ATCGTTGAACCCAACGAAAATTTCGGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCGAAAGAACAGCTACCGGATTTAGGCGAAATGATTACAACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JDV1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

97.091

100

0.971