Detailed information NTG0845512

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: V2189_RS27985
• Genome accession: NZ_CP143908
• Coordinates: 6033730..6034755 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PA4_YH3_36.21_ST773_NDM1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6028730..6039755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2189_RS27960 (V2189_27960)	-	6028920..6029237 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
V2189_RS27965 (V2189_27965)	trkA	6029385..6030758 (-)	1374	WP_003111375.1	Trk system potassium transporter TrkA	-
V2189_RS27970 (V2189_27970)	rsmB	6030785..6032089 (-)	1305	WP_023092224.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
V2189_RS27975 (V2189_27975)	fmt	6032086..6033030 (-)	945	WP_031756537.1	methionyl-tRNA formyltransferase	-
V2189_RS27980 (V2189_27980)	def	6033085..6033591 (-)	507	WP_003107059.1	peptide deformylase	-
V2189_RS27985 (V2189_27985)	tsaP	6033730..6034755 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
V2189_RS27990 (V2189_27990)	dprA	6034890..6035978 (+)	1089	WP_033989019.1	DNA-processing protein DprA	Machinery gene
V2189_RS27995 (V2189_27995)	-	6036019..6036576 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
V2189_RS28000 (V2189_28000)	-	6036586..6037563 (-)	978	WP_033938270.1	NADPH:quinone reductase	-
V2189_RS28005 (V2189_28005)	hemF	6037754..6038671 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
V2189_RS28010 (V2189_28010)	aroE	6038729..6039553 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=845512 V2189_RS27985 WP_003097294.1 6033730..6034755(+) (tsaP) [Pseudomonas aeruginosa strain PA4_YH3_36.21_ST773_NDM1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=845512 V2189_RS27985 WP_003097294.1 6033730..6034755(+) (tsaP) [Pseudomonas aeruginosa strain PA4_YH3_36.21_ST773_NDM1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAATGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393