Detailed information NTG0084546

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG74_RS24330
• Genome accession: NZ_AP027185
• Coordinates: 4725407..4726432 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NIID080884
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4720407..4731432

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG74_RS24320 (NI080884_4686)	rpmE	4722638..4722850 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QMG74_RS24325 (NI080884_4687)	priA	4723053..4725251 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
QMG74_RS24330 (NI080884_4688)	cytR	4725407..4726432 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QMG74_RS24335 (NI080884_4689)	ftsN	4726524..4727483 (+)	960	WP_000068834.1	cell division protein FtsN	-
QMG74_RS24340 (NI080884_4690)	hslV	4727576..4728106 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QMG74_RS24345 (NI080884_4691)	hslU	4728116..4729447 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QMG74_RS24350 (NI080884_4692)	menA	4729514..4730440 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG74_RS24355 (NI080884_4693)	rraA	4730533..4731018 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QMG74_RS24360 (NI080884_4694)	zapB	4731103..4731348 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=84546 QMG74_RS24330 WP_000644904.1 4725407..4726432(+) (cytR) [Escherichia coli strain NIID080884]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=84546 QMG74_RS24330 WP_000644904.1 4725407..4726432(+) (cytR) [Escherichia coli strain NIID080884]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628