Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   QSG87_RS15005 Genome accession   NZ_CP127923
Coordinates   3077381..3078259 (-) Length   292 a.a.
NCBI ID   WP_087512746.1    Uniprot ID   A0A3B7LY88
Organism   Acinetobacter chinensis strain SAAc573     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3072381..3083259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG87_RS14980 (QSG87_14980) miaB 3073325..3074779 (+) 1455 WP_317023508.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  QSG87_RS14985 (QSG87_14985) - 3074819..3075901 (+) 1083 WP_087512742.1 PhoH family protein -
  QSG87_RS14990 (QSG87_14990) ybeY 3075920..3076405 (+) 486 WP_317023509.1 rRNA maturation RNase YbeY -
  QSG87_RS14995 (QSG87_14995) - 3076520..3076813 (+) 294 WP_087549993.1 antibiotic biosynthesis monooxygenase -
  QSG87_RS15000 (QSG87_15000) - 3076959..3077372 (+) 414 WP_317023510.1 hypothetical protein -
  QSG87_RS15005 (QSG87_15005) tonB2 3077381..3078259 (-) 879 WP_087512746.1 energy transducer TonB Machinery gene
  QSG87_RS15010 (QSG87_15010) - 3078491..3079180 (+) 690 WP_087549991.1 hypothetical protein -
  QSG87_RS15015 (QSG87_15015) - 3079339..3080052 (+) 714 WP_317023511.1 DUF3108 domain-containing protein -
  QSG87_RS15020 (QSG87_15020) - 3080144..3080719 (+) 576 WP_317023512.1 xanthine phosphoribosyltransferase -
  QSG87_RS15025 (QSG87_15025) - 3080906..3082237 (-) 1332 WP_087549989.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33247.94 Da        Isoelectric Point: 9.1308

>NTDB_id=845254 QSG87_RS15005 WP_087512746.1 3077381..3078259(-) (tonB2) [Acinetobacter chinensis strain SAAc573]
MLRKINFSPLVNNWWKDPVFATAVIMAAVLHLLVLSVQFTMSEPQDAAVREIAVTMRPSETEVKNADFLAQADQQGSGTF
REAHRMSSDMPAPMIDQSAGEQKQESREQMQQKKELSFEEKVLMTTLSWQKEAEQNRRKKAADEMNSQYQAKAAMIASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDMTAAYMEKFRQKVEFYGNRYYPDLAKAQQLAGEVRLMVILNQNGGIRAIRLIE
GSGHSVLDEAAKASVRKAAPFGAFDVKMKDISELRIVRTWRFDPADAEFEVN

Nucleotide


Download         Length: 879 bp        

>NTDB_id=845254 QSG87_RS15005 WP_087512746.1 3077381..3078259(-) (tonB2) [Acinetobacter chinensis strain SAAc573]
ATGCTCAGGAAAATTAACTTTTCTCCACTGGTGAATAACTGGTGGAAAGACCCTGTTTTTGCAACAGCAGTGATCATGGC
TGCCGTTCTGCATTTACTGGTGTTGTCTGTGCAGTTCACCATGTCCGAACCACAGGATGCAGCGGTCAGGGAAATTGCGG
TCACCATGCGCCCGAGTGAGACGGAAGTTAAAAATGCCGATTTTCTAGCACAGGCAGATCAGCAGGGTTCAGGAACATTC
CGTGAAGCACATCGTATGTCCAGTGATATGCCTGCTCCAATGATTGACCAGAGTGCAGGGGAGCAGAAGCAGGAAAGTCG
GGAGCAGATGCAGCAGAAAAAAGAGCTGAGCTTCGAAGAAAAAGTACTGATGACCACGCTCAGCTGGCAGAAAGAAGCGG
AGCAGAACCGTCGTAAAAAAGCGGCAGATGAAATGAACAGCCAGTATCAGGCAAAGGCAGCCATGATTGCCAGTCTGGAA
GCACAGTATCTGCAGCGTCAGCAGAACTTCAGCCGTCAGCAGAAAATTAAAACTGTGGATGGTATTCAGGCTAAACAGGA
TATGACAGCTGCTTATATGGAAAAATTCCGGCAAAAAGTCGAGTTTTACGGTAACCGCTATTATCCCGACCTGGCAAAAG
CACAGCAGCTAGCTGGAGAAGTACGCCTGATGGTGATTCTGAATCAGAACGGCGGAATCCGTGCTATTCGCCTGATTGAA
GGTTCAGGTCATTCTGTGCTTGATGAGGCAGCAAAAGCATCTGTCCGTAAAGCAGCCCCATTCGGTGCATTTGATGTAAA
AATGAAAGATATTTCTGAACTTCGAATTGTCAGAACATGGCGTTTTGATCCTGCAGATGCTGAGTTTGAGGTGAACTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7LY88

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

68.041

99.658

0.678