Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   QSG87_RS13405 Genome accession   NZ_CP127923
Coordinates   2741830..2746458 (-) Length   1542 a.a.
NCBI ID   WP_317023364.1    Uniprot ID   -
Organism   Acinetobacter chinensis strain SAAc573     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2736830..2751458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG87_RS13375 (QSG87_13375) elsL 2737902..2738405 (-) 504 WP_317023361.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  QSG87_RS13380 (QSG87_13380) - 2738415..2738789 (-) 375 WP_087513339.1 YbaN family protein -
  QSG87_RS13385 (QSG87_13385) - 2738879..2739787 (+) 909 WP_087549442.1 DUF1853 family protein -
  QSG87_RS13390 (QSG87_13390) - 2739877..2740020 (+) 144 WP_171405459.1 entericidin A/B family lipoprotein -
  QSG87_RS13395 (QSG87_13395) dapE 2740138..2741271 (+) 1134 WP_317023362.1 succinyl-diaminopimelate desuccinylase -
  QSG87_RS13400 (QSG87_13400) - 2741372..2741833 (-) 462 WP_317023363.1 hypothetical protein -
  QSG87_RS13405 (QSG87_13405) chpA 2741830..2746458 (-) 4629 WP_317023364.1 Hpt domain-containing protein Regulator
  QSG87_RS13410 (QSG87_13410) - 2746610..2748682 (-) 2073 WP_087513334.1 methyl-accepting chemotaxis protein -
  QSG87_RS13415 (QSG87_13415) - 2748724..2749260 (-) 537 WP_087549445.1 chemotaxis protein CheW -
  QSG87_RS13420 (QSG87_13420) - 2749264..2749632 (-) 369 WP_317023365.1 response regulator -
  QSG87_RS13425 (QSG87_13425) pilG 2749670..2750056 (-) 387 WP_087513331.1 twitching motility response regulator PilG Regulator
  QSG87_RS13430 (QSG87_13430) - 2750419..2750973 (+) 555 WP_087549651.1 hypothetical protein -

Sequence


Protein


Download         Length: 1542 a.a.        Molecular weight: 171882.74 Da        Isoelectric Point: 4.1858

>NTDB_id=845248 QSG87_RS13405 WP_317023364.1 2741830..2746458(-) (chpA) [Acinetobacter chinensis strain SAAc573]
MKEILKNLVENTTLPEDSYLDQDAEILEIFVEELEEIFTELDEQFPAWFENASDTETLITIRRHFHTLKGSGRMVGAKSA
GELAWTVEDILNRVMGGSLVLNLPIQKFALTVYKIFQFRLYPDFKNVQEAAIDLRPLVLLGQQLQQNLSPEPALEDLLQL
SETLSAENTLTGLEFADDESVTAQVTDATAADEAETVQEELAEVSEEFTAVQDDIFVQETMSIFLEEAEEHLATIEAFLA
EEQSSKQDYNGLIRALHTLRGSSSMAQIEHIFDASSNVENLFKNLLQDEIVSTSRETALLVQYAEFVGDYLLTLRNGADQ
SRLNTIYQTFNDVWDNYGFSVQSGEHEANPQGLVSRLIELNIDLLLDAEFEFDKRAKVEFPEYIQELSEQAEHLINNTDN
RASEGIHQFTLELKSAYDGVVEKPALLTLDYAYELFAKAHQEFIYLFDTLAAGQRVSLTDDMQKLLNELAAFVQQDIEQF
ESEPAAQSDLSTESAEAEDISVAVQEPQPVQAASVESAGLDLAKLSRQLQAAKSQSGAADTNTDFDPDLLDIFLEEAEEL
LAGMDQDLNTWTVEQSNTAALNNLMRYLHTLKGGANMVQATHIGLISHEIETIYERIINQQITVTPGLIGIIRLVQDDIA
DRIQTIRDEQVDYSSAQAVDILKNISELSKGGIASTSEVTEPKVESASEHIDDALAFAVSDQDELPELDDVISAASDIIA
IEPLLSEPELTEPLTAETLIEQPAAEYAEPAQSQKHADLESVRSIVEETFLEEAEELLDSSDLLLAQWFEQRSDRSILLQ
LQRAAHSLKGGARMAEIEPVASIAYELETIFEQFAVHQFNSNAYDPLLQTTLAWLRQAIFEHDYTNFDSLKSNLESIEYV
NVTAQLPDRLTHKDILAPSRTFEFVQGDGTEPPAMMGEWGDTSSRDDSNEMIRISADLVEKMIDLSGENSINRSRIEMDL
GQLGNTLNEMELAIKRLADQLRRMDGELESQILAKHGTDNSRYEDFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTIAE
KIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPAELLVQNTEGELDRTILERLVTPFEHML
RNAIDHGIEEDTAQRLEAGKPEVGKIELNITRQGTDVVVTFSDDGKGIDDTRILEKALSQGLIKPDQKVSKEETLQLIFH
PGLSTAKAVTQISGRGVGLDVVQSEIKALGGLVTVDSEIGKGTTFTIRVPTTVAVSDALMVKAGDQQFAIPLAQIERIVR
IAPSTLETYFDGNDDYFKIDNESYKLRYISEFVANQPLPRLHSIAHSLPVLLIKGSTGQSIALLVDQLVGSRGQIVVKPI
GQQFSGIAAIAGATILGDGQVCLILDGQSIARQILATQRTKHASEHRESSRHSNARRLVMIVDDSVTVRKVTSRLLERQG
YDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHDIHQKLPIIMITSRTGEKHRERAFSLGVTHYMGKP
FQEAELLTNIENLLAAEYEVNG

Nucleotide


Download         Length: 4629 bp        

>NTDB_id=845248 QSG87_RS13405 WP_317023364.1 2741830..2746458(-) (chpA) [Acinetobacter chinensis strain SAAc573]
ATGAAAGAAATATTAAAAAATTTAGTTGAAAATACAACTCTTCCCGAAGATAGCTATCTTGATCAGGATGCAGAAATTCT
TGAAATTTTTGTCGAAGAACTGGAAGAAATCTTCACTGAACTGGATGAGCAGTTTCCGGCATGGTTTGAAAATGCCTCCG
ATACTGAAACATTGATCACTATCCGTCGCCACTTTCACACATTGAAAGGTTCTGGGCGTATGGTCGGGGCTAAATCTGCC
GGTGAACTGGCATGGACAGTAGAAGATATACTGAACCGTGTCATGGGGGGATCACTGGTTCTGAATCTTCCGATTCAGAA
ATTTGCTTTAACGGTTTATAAAATTTTTCAGTTCAGACTTTATCCTGATTTTAAAAATGTTCAGGAAGCTGCAATTGATT
TAAGACCATTGGTGTTGTTAGGACAGCAGCTTCAGCAGAATCTCAGTCCTGAACCTGCACTTGAAGATTTACTTCAGTTG
TCTGAAACGCTGTCTGCTGAGAATACGCTGACAGGTCTTGAGTTTGCAGATGATGAGTCGGTTACTGCACAAGTGACTGA
TGCAACGGCAGCTGATGAAGCTGAAACTGTTCAAGAAGAGCTTGCGGAAGTATCTGAAGAATTCACTGCTGTTCAGGATG
ACATCTTTGTTCAGGAAACAATGTCTATTTTCCTTGAAGAAGCAGAAGAGCATCTGGCGACCATTGAAGCTTTTCTTGCA
GAAGAGCAGTCATCAAAACAGGACTATAACGGGCTGATCCGTGCTCTGCATACGCTTCGTGGCAGTTCGTCCATGGCACA
GATTGAGCATATTTTTGATGCCAGTTCCAATGTGGAAAATCTGTTTAAAAACCTGTTGCAGGATGAAATTGTATCCACTT
CAAGGGAAACAGCATTACTGGTTCAGTATGCTGAGTTTGTGGGCGATTATCTGCTTACGCTTCGAAATGGAGCTGATCAG
TCAAGACTGAATACGATTTATCAGACATTTAACGATGTGTGGGATAACTACGGTTTCAGTGTTCAGTCTGGAGAACATGA
AGCAAATCCTCAAGGTCTGGTTTCCAGGCTGATTGAACTCAATATTGATCTGCTGCTTGATGCTGAGTTTGAGTTTGATA
AACGTGCCAAAGTTGAATTCCCTGAATATATTCAGGAGTTAAGCGAGCAGGCAGAGCATCTGATTAATAATACAGACAAC
CGTGCATCTGAAGGTATTCATCAGTTCACACTGGAGCTGAAGTCTGCTTACGATGGTGTGGTTGAAAAGCCGGCACTTCT
GACTCTTGACTATGCCTATGAGCTGTTTGCAAAGGCACATCAGGAATTTATCTATCTGTTTGATACACTGGCAGCAGGAC
AGCGTGTCAGCCTGACAGATGACATGCAGAAACTTTTGAATGAGCTGGCAGCATTCGTACAGCAGGATATCGAACAGTTT
GAATCCGAGCCAGCTGCTCAGTCAGATCTGAGTACTGAATCTGCTGAAGCTGAAGATATTTCGGTCGCTGTTCAGGAACC
ACAACCAGTACAGGCAGCATCTGTCGAGTCGGCGGGTCTGGATCTTGCAAAACTGTCCCGACAGTTGCAGGCTGCTAAGT
CCCAGTCCGGTGCAGCTGACACAAATACTGATTTTGACCCTGATCTGCTTGATATTTTCCTTGAAGAAGCAGAAGAACTT
CTTGCAGGGATGGATCAGGATCTGAATACATGGACAGTAGAACAGTCCAATACTGCTGCACTGAATAATCTGATGCGTTA
TCTGCATACACTGAAAGGTGGTGCAAATATGGTTCAGGCTACACACATTGGTCTGATTTCACATGAAATAGAAACGATTT
ACGAACGGATTATCAACCAGCAGATTACGGTTACTCCTGGATTGATCGGTATTATCCGGCTTGTTCAGGATGATATCGCT
GACCGTATTCAGACGATTCGTGATGAGCAGGTTGATTATTCTTCCGCTCAGGCAGTGGATATACTGAAAAATATTTCAGA
ACTGTCAAAAGGTGGTATTGCATCCACCTCTGAAGTTACAGAGCCGAAAGTTGAATCTGCTTCTGAGCATATTGATGATG
CACTGGCGTTTGCAGTATCCGATCAGGATGAGCTGCCAGAACTGGATGATGTCATCAGTGCGGCGTCAGATATTATTGCG
ATTGAGCCTTTGTTATCTGAACCTGAGCTGACAGAGCCTCTCACTGCTGAAACATTGATTGAACAACCTGCTGCAGAGTA
CGCTGAACCTGCACAAAGTCAGAAACATGCTGATCTTGAAAGTGTGCGTTCAATTGTGGAAGAAACCTTCCTTGAAGAAG
CAGAAGAACTGCTGGATTCTTCGGATCTGTTACTTGCTCAATGGTTTGAACAGCGTTCAGACCGTAGTATTCTGCTTCAG
TTACAGCGTGCCGCGCACAGCTTGAAGGGCGGTGCCCGTATGGCTGAAATTGAGCCGGTTGCGTCTATTGCTTATGAGCT
GGAAACGATCTTTGAGCAGTTTGCTGTACACCAGTTCAACTCAAATGCTTATGATCCGTTGCTTCAGACGACACTGGCAT
GGTTACGTCAGGCGATATTTGAACATGATTACACCAATTTCGACAGCCTCAAGTCCAATCTTGAGTCCATTGAATATGTC
AACGTAACGGCTCAGTTACCAGACAGGCTGACTCACAAAGATATTCTTGCACCGTCCAGAACCTTTGAGTTTGTTCAGGG
TGATGGTACTGAACCACCTGCAATGATGGGTGAGTGGGGCGATACTTCGAGCCGTGATGACAGTAATGAAATGATCCGTA
TCTCAGCCGACCTGGTTGAGAAGATGATTGACCTGTCAGGTGAAAACTCAATTAACCGTTCACGTATTGAGATGGATCTT
GGGCAGTTGGGTAATACGCTGAATGAAATGGAGCTTGCGATTAAGCGACTGGCGGATCAGCTGCGTCGAATGGATGGTGA
GCTTGAATCACAGATTCTGGCAAAACATGGTACTGACAACTCACGCTATGAAGATTTCGATCCACTTGAGATGGACCAGT
ATTCATCTTTAAATCAGTTATCCAAATCACTTGCGGAGTCTGCATCGGATCTGGTGGACTTTAAGAGCACGATTGCGGAA
AAAATCCGTGATGCAGAAGGTCTGTTATTACAGCAGTCCCGTATCCAGGCAGAAATTCAGGAAAGTCTGATGCGGACACG
TCTGGTTCCGTTCTCAAGACTGTTGCCCCGTTTACAGCGGATTGTGCGTCAGACCTCATCGACATTGAACCGTCCTGCGG
AACTGCTGGTACAGAATACTGAAGGCGAACTGGACCGTACTATTCTTGAACGCCTGGTGACTCCATTTGAGCATATGCTT
CGAAATGCGATTGACCACGGTATTGAAGAGGATACTGCACAGCGTCTTGAAGCCGGTAAACCTGAAGTCGGTAAAATTGA
ACTCAATATTACCCGTCAGGGAACCGATGTTGTAGTTACATTCAGTGATGACGGTAAGGGTATTGATGATACCCGTATTC
TTGAAAAAGCACTGAGCCAGGGGCTGATTAAACCTGATCAGAAAGTCAGTAAAGAAGAAACTTTACAGCTGATTTTCCAC
CCTGGTTTAAGTACTGCGAAAGCAGTGACACAGATTTCGGGTCGTGGTGTCGGACTTGATGTCGTGCAGAGCGAAATTAA
AGCCTTAGGCGGTCTGGTAACAGTTGATTCTGAGATTGGTAAAGGAACAACCTTTACCATCCGTGTACCGACAACGGTTG
CGGTCAGTGATGCCCTGATGGTGAAAGCCGGTGATCAGCAGTTTGCTATTCCACTGGCTCAGATTGAACGTATTGTGCGG
ATTGCACCATCTACGCTTGAAACTTATTTTGATGGCAATGACGATTATTTTAAAATTGATAACGAATCCTATAAGTTACG
CTACATTTCAGAATTTGTTGCAAATCAGCCATTACCGCGACTGCACAGTATCGCGCATTCATTACCGGTACTGCTGATTA
AAGGCAGTACGGGGCAGAGTATTGCATTGCTTGTCGATCAGCTGGTTGGTTCACGTGGTCAGATTGTTGTAAAACCGATC
GGACAACAGTTCTCCGGTATTGCAGCGATTGCAGGTGCAACGATCCTTGGTGATGGTCAGGTCTGTCTGATTCTTGATGG
TCAAAGTATTGCACGTCAGATTCTGGCAACACAGCGTACGAAACATGCGTCTGAACACCGTGAGTCATCACGACACAGCA
ATGCACGTCGTCTGGTGATGATTGTGGATGACTCCGTAACAGTACGTAAGGTAACTTCACGTCTGCTTGAACGTCAGGGT
TATGATGTTGTGACAGCCAAAGATGGTGTGGATGCGATGGAGCAGCTGGAAAATGTCAAACCGGATCTGATGCTGCTTGA
TATTGAAATGCCGCGGATGGATGGTTTTGAAGTGACCAACCTGGTAAGACACCATGACATTCATCAGAAACTGCCAATTA
TCATGATTACATCGCGTACAGGTGAGAAACACCGTGAGCGTGCATTCAGTCTGGGTGTGACTCATTATATGGGTAAACCG
TTCCAGGAAGCAGAATTGCTGACCAATATTGAAAATCTGTTGGCGGCTGAATATGAGGTGAATGGATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.716

100

0.6