Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   QSG86_RS06440 Genome accession   NZ_CP127915
Coordinates   1156424..1158646 (-) Length   740 a.a.
NCBI ID   WP_317030732.1    Uniprot ID   A0AA97HYQ7
Organism   Acinetobacter sp. SAAs474     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1151424..1163646
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG86_RS06415 (QSG86_06405) - 1151595..1151855 (-) 261 WP_317030727.1 YdcH family protein -
  QSG86_RS06420 (QSG86_06410) - 1151942..1152271 (-) 330 WP_317030728.1 chaperone modulator CbpM -
  QSG86_RS06425 (QSG86_06415) - 1152282..1153250 (-) 969 WP_317030729.1 DnaJ C-terminal domain-containing protein -
  QSG86_RS06430 (QSG86_06420) - 1153558..1154433 (-) 876 WP_317030730.1 Hsp33 family molecular chaperone HslO -
  QSG86_RS06435 (QSG86_06425) - 1154484..1156331 (-) 1848 WP_317030731.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  QSG86_RS06440 (QSG86_06430) priA 1156424..1158646 (-) 2223 WP_317030732.1 primosomal protein N' Machinery gene
  QSG86_RS06445 (QSG86_06435) gspF 1158780..1159985 (+) 1206 WP_317030733.1 type II secretion system inner membrane protein GspF -
  QSG86_RS06450 (QSG86_06440) gspG 1159998..1160435 (+) 438 WP_317030734.1 type II secretion system major pseudopilin GspG -
  QSG86_RS06455 (QSG86_06445) - 1160560..1161057 (+) 498 WP_317030735.1 YcxB family protein -
  QSG86_RS06460 (QSG86_06450) - 1161175..1161816 (+) 642 WP_317030736.1 fumarylacetoacetate hydrolase family protein -
  QSG86_RS06465 (QSG86_06455) msrA 1162213..1162737 (-) 525 WP_317030737.1 peptide-methionine (S)-S-oxide reductase MsrA -
  QSG86_RS06470 (QSG86_06460) - 1162969..1163433 (-) 465 WP_317030738.1 META domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84440.50 Da        Isoelectric Point: 9.0311

>NTDB_id=845218 QSG86_RS06440 WP_317030732.1 1156424..1158646(-) (priA) [Acinetobacter sp. SAAs474]
MQNTQDLKPIHYRIRVAVPVHLYDCFDYLVTEDQYQQIEAGSRVSISFGRQNLIGIVVEKLPPDAPLNPSFKLKLITEIL
DHQPILDEKVLSLLTWSAQYYQFPIGEVMQSALPTLLRQGKPANILHRVWTLVDHQAEDKIKRSVKQQDAYKILKLHPQG
TSENILNLAGIESTTLKALERKNICQCTLETQDLTVMPVSLAQMPLTANEEQKKAIERILQAQRQYHAFLLDGLTGSGKT
EVYLQVMEQVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQYAQAGKASIILGTRSAIYTPL
ARLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLEGCPIILGSATPSIDCYGLVAQGKLTQLKLNQRAGSARIPKIHV
IDLKTSQKQHGISQLLINEIQQRLIKKEQVLIFLNRRGYAPVLICEQCAWQAKCPHCDANFTLHQHPYPHLHCHHCGTIQ
RKPEHCPQCQHQELKPIGMGTAKVEQHLNEIFPDFDVIRVDRDSTQRVGSWQKIYDRVQSSQPVILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDFRAPERTAQLIVQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLINHDYRTFAKQTLKERQAALL
PPYRYSALIRCESKNQQSNQDFLSQYAQYLRTASNHIIDIWGPIPAPMERKAGRYQAHMVLFSQDRARLHFYLRQCWQNM
LQQKPSNMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=845218 QSG86_RS06440 WP_317030732.1 1156424..1158646(-) (priA) [Acinetobacter sp. SAAs474]
ATGCAAAATACTCAAGACTTAAAGCCGATTCACTATCGTATTCGCGTTGCAGTACCTGTACATTTATATGATTGCTTTGA
TTATCTAGTAACCGAAGATCAATATCAGCAAATTGAAGCGGGTAGCCGTGTATCCATTTCATTTGGGCGACAGAATTTAA
TTGGTATTGTGGTCGAGAAACTGCCTCCCGATGCCCCTTTAAACCCCTCATTTAAATTGAAATTAATTACAGAAATTTTA
GATCATCAGCCCATCTTAGATGAGAAAGTTTTAAGTTTGTTGACATGGTCAGCACAATATTATCAATTCCCGATTGGCGA
GGTGATGCAAAGTGCACTACCAACCTTATTACGCCAAGGAAAACCCGCCAACATTTTGCATCGGGTCTGGACACTCGTAG
ATCATCAGGCTGAAGATAAAATTAAACGTTCAGTAAAACAACAGGATGCATATAAAATACTCAAATTACATCCTCAAGGC
ACATCTGAGAATATTCTAAATTTGGCGGGCATCGAGAGTACGACATTAAAAGCACTTGAGCGCAAGAATATTTGTCAATG
CACACTCGAAACACAAGATCTCACGGTAATGCCTGTCAGCTTGGCACAAATGCCATTGACTGCAAATGAGGAGCAAAAAA
AAGCCATTGAGCGTATTTTACAAGCCCAACGGCAATACCATGCCTTTTTACTGGATGGTTTGACAGGTAGCGGGAAAACT
GAAGTTTATTTACAAGTCATGGAGCAGGTATTAAAACAAGGTAAACAAGTGTTAGTTCTCGTCCCTGAAATTGGCCTTAC
ACCTCAGACTATTAGCCGATTTCAGTCACGTTTTCATTGTCATATTGCTTTACTCCATTCGGGTCTAAATGATTCAAAAC
GCTTACAGGCATGGCAATATGCTCAAGCAGGTAAAGCTTCGATTATTTTAGGTACACGTTCTGCTATTTATACACCGCTG
GCACGTTTAGGTTTAATTATCTTGGATGAGGAGCATGATTTATCATTTAAGCAACAAGAAGGGTTTCGTTATCATGCACG
TGATGTTGCATTGTATCGAGCACATTTAGAAGGTTGTCCGATTATTTTAGGATCGGCAACGCCCAGTATTGATTGCTATG
GTTTAGTTGCACAAGGTAAATTAACTCAGTTAAAACTCAATCAAAGAGCGGGATCGGCACGTATCCCGAAAATTCATGTC
ATTGACTTAAAAACCAGCCAAAAACAACACGGTATCAGTCAATTATTAATTAATGAAATTCAACAACGCTTGATCAAAAA
AGAACAAGTCCTGATTTTTTTAAATCGACGAGGCTATGCACCTGTACTGATTTGCGAACAGTGCGCTTGGCAAGCAAAAT
GTCCCCATTGTGATGCGAACTTTACCTTACATCAACATCCTTATCCACATTTACACTGCCATCATTGTGGTACGATTCAG
CGTAAACCAGAACACTGCCCCCAATGCCAACATCAAGAACTTAAACCGATTGGAATGGGAACGGCCAAAGTAGAACAACA
TCTCAATGAAATTTTTCCTGATTTTGATGTTATTCGAGTTGATCGTGACTCCACTCAGCGCGTAGGAAGCTGGCAAAAAA
TTTACGATCGGGTGCAAAGCAGCCAACCTGTCATTTTACTCGGTACACAAATGTTGGCTAAAGGGCATCATTTTCCCTAT
GTCACTTTGGTGGCTATTCTTGATATCGATGCAGGACTGTTAAGTGTTGATTTTCGTGCTCCTGAACGTACGGCACAACT
CATTGTACAGGTTGCTGGCCGTGCCGGCCGTGGTGAAAAAAAAGGAGAGGTTTATTTACAGACCTTAAGACCAGATCATC
CTTTATTAAATACCCTCATTAATCATGATTATCGTACCTTTGCCAAACAAACACTCAAAGAGCGTCAAGCCGCCTTACTC
CCACCCTATCGTTATAGTGCTTTGATTCGCTGTGAATCAAAAAATCAGCAAAGCAATCAAGATTTTTTAAGCCAATATGC
ACAATATTTACGAACAGCATCCAATCATATTATTGATATTTGGGGACCAATACCTGCTCCAATGGAACGTAAAGCGGGCC
GTTATCAAGCACATATGGTTTTATTCTCTCAAGATCGTGCACGATTACATTTTTATTTACGTCAATGCTGGCAAAATATG
TTGCAGCAAAAACCTTCAAATATGAAACTCAGTTTAGATATTGATCCACAAGAATTAAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.503

98.784

0.716