Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   QSG83_RS14585 Genome accession   NZ_CP127892
Coordinates   2806100..2807662 (+) Length   520 a.a.
NCBI ID   WP_317028067.1    Uniprot ID   -
Organism   Acinetobacter towneri strain SAAt401     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2801100..2812662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG83_RS14565 (QSG83_14575) - 2801499..2802803 (+) 1305 WP_317028065.1 homoserine dehydrogenase -
  QSG83_RS14570 (QSG83_14580) thrC 2802861..2804000 (+) 1140 WP_104852917.1 threonine synthase -
  QSG83_RS14575 (QSG83_14585) - 2804117..2805208 (-) 1092 WP_317028066.1 D-alanyl-D-alanine endopeptidase -
  QSG83_RS14580 (QSG83_14590) - 2805424..2806059 (+) 636 WP_004975702.1 response regulator -
  QSG83_RS14585 (QSG83_14595) pilS 2806100..2807662 (+) 1563 WP_317028067.1 ATP-binding protein Regulator
  QSG83_RS14590 (QSG83_14600) pilR 2807732..2809165 (+) 1434 WP_179988997.1 sigma-54 dependent transcriptional regulator Regulator
  QSG83_RS14595 (QSG83_14605) - 2809215..2810378 (-) 1164 WP_136144310.1 S41 family peptidase -
  QSG83_RS14600 (QSG83_14610) gpmI 2810403..2811950 (-) 1548 WP_004975686.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 520 a.a.        Molecular weight: 59252.71 Da        Isoelectric Point: 7.0184

>NTDB_id=845108 QSG83_RS14585 WP_317028067.1 2806100..2807662(+) (pilS) [Acinetobacter towneri strain SAAt401]
MPDLKQHSELNQYHLGMWYGTYRLLIAFCLLLITLLTFQQLGTQYQHPGLYLYTLVCYFIFSCLQLISYKYIPFKSTQQL
TLFFAVDIIALSSLTFASDGPNLYLSLLFAITIFAASLLLQKRKALAITLIAMIMVIYQHFVGSLLDFSSLNNIGQSALL
AFLFWVVYGSGRIAVRRFQILENLNFSQSLELNRLQNINRYILEQTEMGYLVLDENCYVVLSNPAACHLLGIHPKYAHAT
YPLYKIQPDLFDLFKFDQLQDGEKFQFESQLSHFHVHIQVQKLKVPHQTLTLLALQDGRKINQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANNLFTGSDAAQQQLLSDMISKQATRIDKIIHDTLSMVKNKQTTPVAIQLNQFLPQFIQEDLPDAAS
QIQLTLTEQLSIQFDESQFRQVLINLIRNAIRHNAAQQPIEITVYPKATYIYIDVRDFGAGVASQDLLYLFQPFFSTEID
GTGLGLYLSHSFCEANQAKLSYVEQEQGACFRMKCLRAIE

Nucleotide


Download         Length: 1563 bp        

>NTDB_id=845108 QSG83_RS14585 WP_317028067.1 2806100..2807662(+) (pilS) [Acinetobacter towneri strain SAAt401]
ATGCCAGATTTAAAACAACATTCTGAGTTAAATCAGTATCATCTTGGCATGTGGTATGGTACTTACCGACTGCTGATTGC
CTTTTGTTTGCTGCTGATTACCCTGCTCACCTTTCAGCAGCTTGGCACACAATATCAGCACCCGGGTTTATATCTGTATA
CCTTGGTCTGCTATTTTATTTTTAGCTGCCTGCAACTGATCAGCTATAAATATATTCCTTTTAAAAGCACGCAACAACTG
ACCCTGTTTTTTGCAGTCGATATTATCGCGCTCAGTAGCCTGACTTTTGCCAGCGATGGCCCTAATTTATATTTAAGTCT
GCTGTTTGCGATCACGATTTTTGCAGCATCACTCTTGCTGCAAAAGCGTAAAGCCTTAGCCATTACCCTCATCGCGATGA
TTATGGTGATTTACCAACACTTTGTTGGGAGTTTGCTGGACTTTTCATCACTCAATAATATTGGTCAAAGTGCGCTATTG
GCATTTTTATTTTGGGTGGTTTATGGCAGTGGACGTATTGCAGTACGGCGTTTCCAAATTTTAGAAAATCTAAATTTTTC
GCAATCTTTGGAATTAAACCGCCTACAAAATATCAACCGTTATATTTTAGAACAAACCGAAATGGGCTATTTGGTTTTAG
ATGAAAATTGCTATGTCGTCCTCAGCAACCCTGCAGCCTGTCATTTGTTGGGGATTCATCCTAAATATGCGCACGCGACC
TATCCATTGTATAAAATTCAGCCCGATTTATTTGATCTGTTCAAATTTGATCAATTGCAAGATGGAGAAAAATTTCAATT
CGAGTCGCAACTAAGTCATTTTCATGTGCATATTCAGGTACAAAAACTCAAAGTGCCACATCAAACGCTGACTTTATTGG
CGCTGCAAGATGGACGTAAAATCAATCAGCAAGTCCAGCAACTCAAATTAGCCGCCTTAGGACAACTCTCTGCCAGTATT
GCGCACGAAATTCGTAACCCGTTGGCAGCCATTGTACAAGCCAACAATTTATTTACAGGCAGTGATGCTGCACAGCAACA
ATTGCTGTCGGACATGATCAGTAAACAAGCGACACGGATTGATAAGATTATTCACGACACGCTGAGTATGGTCAAAAATA
AACAAACCACGCCTGTCGCGATTCAGCTCAATCAATTTTTGCCACAATTCATTCAGGAAGATTTACCTGATGCAGCGAGT
CAAATTCAGCTTACACTGACCGAACAACTGAGTATTCAGTTTGATGAATCGCAGTTTCGCCAAGTGCTAATTAATCTGAT
TCGTAACGCCATTCGGCACAATGCTGCACAACAACCTATTGAGATTACGGTCTATCCGAAAGCAACTTATATTTATATTG
ATGTGCGGGATTTTGGTGCAGGTGTCGCCAGTCAAGATCTCCTCTATCTGTTCCAGCCATTTTTCAGTACCGAAATCGAT
GGAACTGGTTTAGGATTGTATCTATCGCATAGTTTTTGCGAGGCGAATCAAGCCAAGCTGAGCTATGTAGAACAAGAACA
AGGCGCATGTTTCAGGATGAAATGTCTACGTGCCATTGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-514)

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

59.01

97.115

0.573