Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   QSG83_RS13930 Genome accession   NZ_CP127892
Coordinates   2662512..2664734 (+) Length   740 a.a.
NCBI ID   WP_317028052.1    Uniprot ID   -
Organism   Acinetobacter towneri strain SAAt401     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2657512..2669734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG83_RS13905 (QSG83_13915) tusA 2657683..2657940 (-) 258 WP_178318649.1 sulfurtransferase TusA -
  QSG83_RS13910 (QSG83_13920) - 2658138..2658977 (+) 840 WP_004975954.1 CBS domain-containing protein -
  QSG83_RS13915 (QSG83_13925) lnt 2658974..2660530 (+) 1557 WP_004975952.1 apolipoprotein N-acyltransferase -
  QSG83_RS13920 (QSG83_13930) gspG 2660643..2661077 (-) 435 WP_004975950.1 type II secretion system major pseudopilin GspG -
  QSG83_RS13925 (QSG83_13935) gspF 2661154..2662359 (-) 1206 WP_004975948.1 type II secretion system inner membrane protein GspF -
  QSG83_RS13930 (QSG83_13940) priA 2662512..2664734 (+) 2223 WP_317028052.1 primosomal protein N' Machinery gene
  QSG83_RS13935 (QSG83_13945) - 2664807..2666648 (+) 1842 WP_317028053.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  QSG83_RS13940 (QSG83_13950) hslO 2666699..2667574 (+) 876 WP_234114070.1 Hsp33 family molecular chaperone HslO -
  QSG83_RS13945 (QSG83_13955) - 2667809..2668273 (+) 465 WP_317028054.1 DUF2147 domain-containing protein -
  QSG83_RS13950 (QSG83_13960) - 2668530..2668991 (+) 462 WP_317028055.1 DUF2147 domain-containing protein -
  QSG83_RS13955 (QSG83_13965) - 2669374..2669709 (+) 336 WP_004975930.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83779.06 Da        Isoelectric Point: 8.9334

>NTDB_id=845102 QSG83_RS13930 WP_317028052.1 2662512..2664734(+) (priA) [Acinetobacter towneri strain SAAt401]
MPDSTLDPQPVYRIRVAVPVYLYDCFDYMLSAAQYQQAKVGARVLVSFGRQNLVGIIVEKLALDTPIDPRFKLKAISELL
DEQAILDPKVLTLLTWSAQYYQFPIGEVMQSALPSLLRQAKPYNLLARTWKLLDAHAEAKITRSEKQQEAYKILKLHPSG
TSENILNLAGIETATLKALANKEICACVLEAQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQHGISQQLIDEIKKRLAKKEQVLVFLNRRGYAPVLICESCAWQAKCPNCDANFTLHHQPYTHLHCHHCGTIH
RKPEQCPACNHAELKPIGMGTAKVEDSLNELFPNVDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSVRPDHPLLTTLVEGDYRKFAKQSLKERKAAQL
PPYRYSALIRCESKSQELNQQFLQQHAQWLREHSEQLIEIWGPIPAPMERKAGRFHAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=845102 QSG83_RS13930 WP_317028052.1 2662512..2664734(+) (priA) [Acinetobacter towneri strain SAAt401]
ATGCCAGATTCCACTTTAGACCCACAGCCTGTTTATCGTATTCGAGTGGCTGTACCCGTATATCTTTACGACTGCTTCGA
TTATATGCTCAGTGCAGCACAATATCAGCAAGCAAAAGTGGGCGCGCGGGTCTTGGTTTCTTTTGGTCGGCAAAACTTGG
TCGGAATTATTGTCGAAAAACTGGCACTCGACACCCCAATTGATCCACGTTTTAAACTCAAAGCCATTAGCGAACTGTTA
GATGAGCAAGCGATTTTAGACCCTAAAGTTTTAACTTTGTTGACATGGTCGGCACAATATTATCAATTCCCGATTGGTGA
AGTGATGCAAAGTGCCTTACCTAGCTTATTGCGCCAAGCCAAACCCTATAATTTATTGGCACGTACTTGGAAATTGTTGG
ATGCACATGCCGAAGCTAAAATTACACGCTCAGAAAAACAACAAGAAGCCTATAAAATTTTAAAGCTGCATCCTTCGGGA
ACTTCTGAAAATATTTTAAATTTGGCAGGCATTGAAACAGCAACCCTAAAAGCCTTGGCGAATAAAGAAATTTGCGCATG
TGTTTTGGAAGCCCAAGATTTTAGCCCAATGCCAGTGACTTTGGCGCAAATGCCTTTAACCCCTAATCCAGATCAGAAAA
AAGCCATCGACAGCGTACTTAAAGTACGGCAGCAATATAAGGCATTTTTACTGGATGGTTTAACGGGTAGCGGTAAAACT
GAAGTGTACTTACACATCATGCATGAGGTACTAAAACAGGGCAAACAAGTGTTGGTGTTAGTACCTGAAATTGGTCTAAC
GCCACAAACCATTAGCCGTTTCCAATCGCGTTTTCACTGCCACATCGCCCTCTTACATTCAGGTTTAAATGATTCCAAGC
GTTTGCAGGCGTGGCAAGCCGCACAAACGGGCAAAGCCTCGATTATTTTAGGTACACGTTCTGCGATTTATACCCCATTG
CCAAATTTAGGCTTGATTATTTTAGATGAAGAACACGACCTGTCTTTTAAACAGCAGGAAGGTTTTCGCTACCATGCCCG
TGATGTTGCGCTCTATCGTGCCCATCTGGAAAATTGCCCTGTTATTTTAGGTTCGGCAACTCCAAGCATTGACAGCTATG
CACTAGTCGATCAAGGCAAAATGCAATGTCTGGAATTAAATCAACGCGCGGGCACGGCACTCATGCCCAAAATCCACCTG
ATTGATTTAAAAATTGCCAAAAAACAGCACGGTATTAGCCAACAATTGATTGATGAAATCAAAAAACGCTTGGCTAAAAA
AGAACAAGTTTTGGTGTTTTTAAACCGACGCGGCTATGCACCCGTATTGATTTGTGAGAGCTGTGCATGGCAAGCCAAAT
GCCCGAATTGTGATGCCAACTTTACCTTGCATCATCAACCTTATACACATTTGCATTGCCACCACTGCGGTACGATTCAT
CGTAAACCTGAGCAATGCCCTGCCTGCAACCATGCAGAACTCAAACCAATTGGCATGGGCACTGCCAAAGTCGAAGACAG
TTTAAACGAGCTGTTTCCCAATGTAGATGTGATTCGGGTAGATCGTGACTCAACCAGTCGTGTTGGCAGTTGGCAAAAAA
TTTATGACCGTATTCAACGCAGCGAACCACTGATTTTATTGGGCACGCAAATGCTGGCCAAAGGGCATCATTTTCCGTAT
GTGACATTGGTGGCAATTTTAGATATTGATTCAGGCTTACTTAGTGTGGATATTCGCGCACCTGAACGCACGGCTCAACT
GATTGTGCAAGTGGCGGGACGTGCAGGGCGCGGTGAGCATAAAGGTGATGTTTATTTGCAAAGTGTGCGTCCTGATCATC
CACTTCTCACCACATTGGTCGAGGGAGATTACCGCAAGTTCGCCAAACAAAGTTTAAAAGAACGCAAAGCTGCACAATTA
CCGCCTTATCGTTACAGTGCTTTGATTCGCTGTGAATCTAAAAGTCAGGAATTAAACCAGCAATTTTTACAACAACATGC
ACAATGGCTTAGAGAACATTCAGAACAATTAATTGAAATTTGGGGGCCGATTCCTGCGCCAATGGAACGTAAAGCAGGAC
GTTTCCATGCACACATGGTGTTGTTGTCTAAAGATCGGGCACGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCGCAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(207-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.414

100

0.735