Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   QSG83_RS05010 Genome accession   NZ_CP127892
Coordinates   834245..838816 (+) Length   1523 a.a.
NCBI ID   WP_317028402.1    Uniprot ID   -
Organism   Acinetobacter towneri strain SAAt401     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 829245..843816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QSG83_RS04985 (QSG83_04985) - 829712..830356 (-) 645 WP_004975522.1 hypothetical protein -
  QSG83_RS04990 (QSG83_04990) pilG 830633..831016 (+) 384 WP_004975524.1 twitching motility response regulator PilG Regulator
  QSG83_RS04995 (QSG83_04995) - 831045..831413 (+) 369 WP_004975526.1 PleD family two-component system response regulator -
  QSG83_RS05000 (QSG83_05000) - 831417..831953 (+) 537 WP_004975527.1 chemotaxis protein CheW -
  QSG83_RS05005 (QSG83_05005) - 832000..834075 (+) 2076 WP_317028401.1 methyl-accepting chemotaxis protein -
  QSG83_RS05010 (QSG83_05010) chpA 834245..838816 (+) 4572 WP_317028402.1 Hpt domain-containing protein Regulator
  QSG83_RS05015 (QSG83_05015) - 838820..839278 (+) 459 WP_004975530.1 hypothetical protein -
  QSG83_RS05020 (QSG83_05020) dapE 839360..840493 (-) 1134 WP_317028403.1 succinyl-diaminopimelate desuccinylase -
  QSG83_RS05025 (QSG83_05025) - 840635..840781 (-) 147 WP_096901466.1 entericidin A/B family lipoprotein -
  QSG83_RS05030 (QSG83_05030) - 840902..841786 (-) 885 WP_178318184.1 DUF1853 family protein -
  QSG83_RS05035 (QSG83_05035) - 841874..842254 (+) 381 WP_004968265.1 YbaN family protein -
  QSG83_RS05040 (QSG83_05040) elsL 842264..842788 (+) 525 WP_131261501.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1523 a.a.        Molecular weight: 168692.25 Da        Isoelectric Point: 4.2205

>NTDB_id=845093 QSG83_RS05010 WP_317028402.1 834245..838816(+) (chpA) [Acinetobacter towneri strain SAAt401]
MKEILKNLVETMTLPEDSYLEQDAEILEIFVEEIEEIFEELNPLFTTWFANPTDQETLVTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVLSGAVTLNTDIQKYAKTVLNIYQYKLYPIFKQVGLIDLDLRPLVLLGQQLQQNQSPEPALEELLVL
ADQLTATDILTGLELADAAVETAAVAAVESSEDVMTAEEMLHTEVAQEAAADASLLAETLAIFVEEAEEHLATIDQFLAQ
DQIHSQDYNGLIRALHTLRGSSSMAQIDQVFQASSKVENLFKTFVQDEIESTSKETALLVQYAEFVRDYLHVLRQGYCDG
LDVIYATFNKAWDSYGFSTSDTEDSNPQGLVSRLIELNIDRLLDAEFEFDKLAQAQFPSYLEELSAQAQLLVEHTDNRAS
VGIHQFTEELKAAYDSVLAKPILLNSEYGYELFAQAHQEFIHLFDTLAAGQRVTVTEDIQKTLNDLTAFVQQDIDAIALE
DAETSVSDNAVETTVVAEPEAVPAAVASENSGTVNLAQLSQRIASDQQNLHADDANKDFDPDLLDIFLEEAEELLVGMDE
DVNTWSKDASDTSALNNLMRYLHTLKGGANMISATHIGLIAHNLESIYERIINNQIVVSPALIQIIRLVQDDIADRIQTI
RDERVDYAAPESIAILGNIVSLAQGDADASVAGAATAAQPEQAVEAEEVDAQPEFAAEALQDTTANLAENDAVIADDAHL
EDTAAAAFEPITETASLEASAESEDEQLHSIVVETFREEAEEILDAADQRLKQWFEQRSDRSILLQLQRAAHSLKGGARM
AEIEPVAQIAYQLESAFEQFAVHQFNSNVYDALLQTTLAWLRDAIFKADYSNYDSLKSSLSAMQFVDVSAQLPERLTHTD
LLSPSRSYEFVQGDGTEPPAMSGEWGETTQLDNSNEMIRISADLVEKMIDLSGENSINRSRIEMELGQLGGTLNEMELAI
KRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSR
IQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPTELVVYNTEGELDRTILERLVTPFEHMLRNAVDHGIEDPAQR
AAANKPEVGKIELNITRQGTDVVVTFVDDGKGIDDAKIKEKALSLGLIKADQNLDKNEILQYIFHPGFTTAQSVTQISGR
GVGLDVVQSEIKALGGHVSVDSTLGQGTTFSIRVPTTVAVSDALMVKVGDQQFAVPLAQIDRIVRIAPTTLESYFNSNED
FFQIDNQNYKLRYLSEFVGNQPLPRLSHVGHSLPVLLIKGSTGQTIALLVDQLIGSRGQIVVKPIGQQFSSIGAIAGATI
LGDGQVCLILDGQNIARQILATQRTKQASDQRDSQRRDTRRLIMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAMEQL
ENVKPDLMLLDIEMPRMDGFEVTNLVRHHDMHSNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEQLLAV
SQG

Nucleotide


Download         Length: 4572 bp        

>NTDB_id=845093 QSG83_RS05010 WP_317028402.1 834245..838816(+) (chpA) [Acinetobacter towneri strain SAAt401]
ATGAAAGAAATATTAAAAAATTTAGTCGAAACAATGACGCTTCCTGAAGATAGTTATCTTGAGCAAGATGCGGAAATTCT
TGAAATTTTTGTCGAAGAAATTGAAGAAATCTTCGAAGAATTAAATCCATTATTTACAACTTGGTTTGCGAACCCAACAG
ATCAAGAAACTTTAGTAACTATTCGTCGTCACTTTCACACTTTAAAAGGCTCGGGTCGCATGGTGGGTGCGAAGTCTGCG
GGCGAGTTGGCATGGACGGTTGAAGATACTTTAAACCGTGTGCTTTCGGGTGCGGTAACACTCAATACTGATATTCAAAA
ATACGCAAAAACTGTTTTAAATATTTATCAATACAAGCTTTATCCAATTTTTAAGCAAGTCGGTTTAATTGATCTTGATT
TACGCCCATTGGTGCTTTTAGGACAACAATTACAGCAAAACCAAAGTCCTGAACCTGCACTGGAAGAGTTGCTAGTTCTA
GCGGATCAACTGACTGCAACTGATATACTGACAGGGCTAGAATTGGCGGATGCTGCAGTTGAAACAGCAGCTGTCGCAGC
AGTTGAATCATCTGAAGATGTAATGACTGCTGAAGAAATGCTGCATACAGAAGTTGCACAAGAAGCGGCTGCTGATGCGA
GTCTATTGGCTGAAACTCTGGCTATTTTTGTAGAAGAAGCTGAAGAGCATTTAGCGACCATTGATCAGTTCTTGGCGCAA
GATCAGATTCACTCACAAGACTATAATGGCTTAATCCGTGCTTTACATACACTGCGCGGCAGTTCGTCTATGGCGCAAAT
TGATCAAGTTTTTCAAGCCAGTTCTAAAGTTGAAAACTTGTTTAAAACATTTGTGCAAGATGAAATTGAATCCACCTCTA
AAGAAACTGCGCTGTTGGTGCAATACGCAGAATTTGTCCGTGATTATCTGCATGTACTTCGCCAAGGTTACTGTGATGGT
TTAGATGTTATCTATGCAACTTTTAATAAAGCATGGGATAGCTACGGCTTTAGCACCAGCGATACAGAAGACTCTAATCC
TCAAGGTTTGGTATCGAGACTCATCGAACTGAATATTGATCGTTTACTTGATGCTGAATTTGAATTTGATAAATTGGCGC
AAGCGCAATTCCCAAGCTATTTAGAAGAACTCAGCGCACAAGCGCAATTATTGGTAGAGCATACTGATAACCGTGCATCA
GTGGGTATCCATCAATTTACTGAAGAACTTAAAGCAGCTTACGACAGTGTTTTAGCCAAGCCAATTTTGCTTAACTCTGA
ATATGGTTATGAGTTATTTGCACAGGCGCACCAAGAGTTTATTCATTTATTTGATACCTTGGCTGCGGGACAGCGTGTTA
CGGTTACTGAAGATATTCAGAAAACCTTAAATGACCTAACTGCATTTGTGCAGCAAGACATTGATGCAATTGCACTTGAA
GATGCTGAAACATCAGTGAGCGACAATGCTGTAGAAACAACAGTTGTTGCAGAACCTGAAGCGGTGCCTGCTGCAGTTGC
TAGCGAAAATTCGGGCACAGTGAATTTGGCGCAATTGTCACAACGTATTGCATCGGATCAACAAAACCTGCATGCCGATG
ATGCCAACAAAGACTTCGATCCTGACTTGCTGGATATCTTCTTGGAAGAAGCAGAAGAGCTTTTGGTGGGTATGGATGAA
GACGTCAACACGTGGTCAAAAGACGCCAGTGACACTTCGGCATTAAATAACTTAATGCGTTATTTGCACACTTTGAAAGG
TGGCGCAAATATGATTTCTGCGACGCATATTGGTTTAATTGCACACAACCTCGAGTCGATTTACGAGCGTATCATTAACA
ACCAAATTGTTGTTTCACCTGCGTTAATTCAAATTATTCGTTTGGTGCAAGATGATATTGCAGACCGTATTCAGACCATT
CGTGATGAGCGTGTGGACTATGCAGCACCAGAGTCAATTGCGATTTTAGGCAACATTGTTAGCTTGGCACAAGGCGATGC
AGATGCGTCAGTCGCAGGTGCAGCAACCGCTGCGCAGCCTGAACAGGCTGTTGAAGCAGAAGAAGTTGATGCACAGCCTG
AGTTCGCGGCAGAAGCGTTGCAAGACACGACTGCAAATTTAGCTGAAAATGACGCAGTTATTGCTGATGATGCACATCTT
GAAGACACCGCTGCTGCGGCATTTGAACCGATCACAGAAACTGCAAGTCTTGAAGCAAGTGCTGAATCTGAAGATGAGCA
ATTACATTCAATTGTGGTTGAGACTTTCAGAGAAGAAGCGGAAGAAATTTTGGATGCTGCAGATCAGCGCTTGAAACAAT
GGTTTGAGCAGCGTAGTGACCGTAGTATCTTGCTTCAATTACAACGTGCGGCACACAGCTTAAAAGGCGGTGCACGTATG
GCTGAAATTGAGCCTGTTGCGCAAATTGCCTATCAACTTGAAAGTGCCTTTGAACAGTTTGCGGTGCATCAATTTAACTC
AAATGTTTATGATGCCTTGTTGCAAACCACGTTAGCGTGGTTACGTGATGCAATTTTCAAAGCAGATTACAGCAATTATG
ACAGCTTAAAATCTAGCTTGTCGGCAATGCAGTTTGTGGATGTATCTGCACAATTGCCTGAGCGTTTAACGCATACCGAC
TTGTTATCGCCAAGCCGTAGTTATGAGTTTGTTCAGGGTGATGGTACAGAGCCGCCTGCAATGTCGGGTGAGTGGGGCGA
AACCACACAGCTGGATAATAGCAATGAGATGATTCGTATCTCGGCCGATTTAGTCGAGAAGATGATTGACTTGTCAGGCG
AGAACTCGATTAACCGTTCACGTATTGAAATGGAGCTTGGGCAACTGGGCGGTACGTTGAATGAGATGGAATTGGCGATT
AAACGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGGAATCGCAAATTATTGCCAAGCACGGTTCTGAAAACTC
ACGTTATGCAGACTTTGACCCATTAGAGATGGACCAATATTCATCGTTGAATCAGTTGTCTAAATCTCTGGCGGAATCTG
CATCGGACTTGGTGGACTTTAAGAGCACCTTGGCTGAAAAAATTCGTGATGCCGAAGGTTTGTTATTACAACAATCACGT
ATTCAGGCTGAAATTCAAGAAAGCTTGATGCGTACACGCCTTGTACCATTCTCACGTTTATTGCCACGTTTACAACGTAT
TGTGCGTCAGACTTCATCGACCTTAAACCGTCCGACAGAACTGGTGGTTTATAACACTGAAGGTGAATTAGACCGTACCA
TTCTAGAGCGTTTGGTGACACCGTTTGAACACATGCTGCGCAACGCGGTCGACCATGGGATTGAAGACCCTGCACAACGT
GCTGCAGCCAATAAACCTGAAGTTGGTAAAATTGAACTGAACATTACCCGTCAAGGCACAGATGTTGTGGTGACTTTTGT
GGATGATGGTAAGGGTATTGATGATGCCAAGATTAAAGAAAAAGCATTGAGCTTAGGTTTAATCAAAGCCGATCAGAATT
TAGATAAAAACGAAATTCTGCAATACATTTTCCACCCAGGCTTTACAACAGCACAATCGGTTACACAAATTTCAGGTCGT
GGCGTTGGTTTAGACGTGGTGCAAAGTGAGATTAAGGCGCTCGGCGGTCACGTTTCTGTAGATTCAACATTAGGTCAAGG
CACAACCTTTAGTATTCGTGTACCAACGACGGTTGCGGTATCCGATGCCTTAATGGTTAAAGTTGGTGATCAACAATTTG
CTGTACCGTTGGCGCAAATTGACCGTATTGTACGTATTGCACCAACCACTTTGGAATCTTACTTCAACAGCAATGAAGAT
TTCTTCCAAATTGACAACCAGAACTACAAGTTACGTTACTTATCTGAGTTCGTTGGCAATCAGCCATTACCGCGTTTAAG
CCATGTGGGTCATTCACTACCTGTTCTGTTAATTAAAGGCAGCACAGGTCAAACCATTGCTTTACTAGTCGATCAGTTGA
TTGGTTCGCGTGGTCAAATTGTTGTGAAACCAATTGGACAACAGTTCTCAAGCATTGGTGCAATTGCAGGCGCAACTATT
TTGGGTGATGGTCAAGTTTGTTTGATTTTGGATGGTCAGAACATTGCCCGTCAAATTCTTGCAACGCAACGTACTAAACA
AGCCAGCGATCAACGTGATAGCCAACGTCGTGATACACGCCGCTTAATTATGATTGTGGATGACTCAGTCACCGTACGTA
AAGTAACTTCACGTCTGCTTGAGCGTCAAGGTTATGACATCGTGACTGCCAAAGATGGTGTCGATGCCATGGAGCAGCTT
GAAAACGTCAAACCTGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTTGAGGTGACTAACCTTGTACG
CCACCACGACATGCATAGCAATCTGCCGATCATCATGATTACGTCACGTACAGGTGAAAAACACCGCGAACGAGCGTTTA
GCTTGGGTGTGACGCACTACATGGGTAAACCGTTCCAAGAGGCAGAATTGCTTGCCAATATTGAACAATTATTAGCAGTT
AGTCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.223

100

0.618