Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   QQ988_RS01440 Genome accession   NZ_CP127869
Coordinates   332304..333200 (+) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain NG02     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 327304..338200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQ988_RS01420 (QQ988_01420) - 327988..329532 (+) 1545 WP_161388242.1 NAD(P)H-binding protein -
  QQ988_RS01425 (QQ988_01425) - 329655..331124 (-) 1470 WP_161388243.1 alkaline phosphatase -
  QQ988_RS01430 (QQ988_01430) - 331423..331602 (+) 180 WP_161388244.1 hypothetical protein -
  QQ988_RS01435 (QQ988_01435) braR 331633..332298 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  QQ988_RS01440 (QQ988_01440) braS 332304..333200 (+) 897 WP_002456718.1 sensor histidine kinase Regulator
  QQ988_RS01445 (QQ988_01445) - 333311..334060 (+) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  QQ988_RS01450 (QQ988_01450) - 334062..336074 (+) 2013 WP_002456335.1 ABC transporter permease -
  QQ988_RS01455 (QQ988_01455) - 336178..336768 (+) 591 WP_002493795.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=844896 QQ988_RS01440 WP_002456718.1 332304..333200(+) (braS) [Staphylococcus epidermidis strain NG02]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=844896 QQ988_RS01440 WP_002456718.1 332304..333200(+) (braS) [Staphylococcus epidermidis strain NG02]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAACGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCGCAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAATTGAATCATGGGACTGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597