Detailed information NTG0844869

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: V2199_RS16920
• Genome accession: NZ_CP143899
• Coordinates: 3648675..3649700 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain PA26_WM3_03.23_ST27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3643675..3654700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V2199_RS16895 (V2199_16895)	aroE	3643877..3644701 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
V2199_RS16900 (V2199_16900)	hemF	3644759..3645676 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
V2199_RS16905 (V2199_16905)	-	3645867..3646844 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
V2199_RS16910 (V2199_16910)	-	3646854..3647411 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
V2199_RS16915 (V2199_16915)	dprA	3647452..3648540 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
V2199_RS16920 (V2199_16920)	tsaP	3648675..3649700 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
V2199_RS16925 (V2199_16925)	def	3649839..3650345 (+)	507	WP_003107059.1	peptide deformylase	-
V2199_RS16930 (V2199_16930)	fmt	3650400..3651344 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
V2199_RS16935 (V2199_16935)	rsmB	3651341..3652645 (+)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
V2199_RS16940 (V2199_16940)	trkA	3652673..3654046 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
V2199_RS16945 (V2199_16945)	-	3654195..3654512 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=844869 V2199_RS16920 WP_003097294.1 3648675..3649700(-) (tsaP) [Pseudomonas aeruginosa strain PA26_WM3_03.23_ST27]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=844869 V2199_RS16920 WP_003097294.1 3648675..3649700(-) (tsaP) [Pseudomonas aeruginosa strain PA26_WM3_03.23_ST27]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393