Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QR692_RS09105 | Genome accession | NZ_CP127854 |
| Coordinates | 1839601..1841847 (-) | Length | 748 a.a. |
| NCBI ID | WP_019291613.1 | Uniprot ID | A0A252CAE6 |
| Organism | Lactococcus petauri strain GB97 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1834601..1846847
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR692_RS09080 (QR692_09080) | fabZ | 1834931..1835389 (+) | 459 | WP_003134189.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| QR692_RS09085 (QR692_09085) | uvrB | 1835416..1837404 (-) | 1989 | WP_003134191.1 | excinuclease ABC subunit UvrB | - |
| QR692_RS09090 (QR692_09090) | - | 1837401..1837856 (-) | 456 | WP_017370530.1 | RNA pyrophosphohydrolase | - |
| QR692_RS09095 (QR692_09095) | def | 1837961..1838587 (+) | 627 | WP_017370260.1 | peptide deformylase | - |
| QR692_RS09100 (QR692_09100) | yqeK | 1838959..1839546 (-) | 588 | WP_019291614.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| QR692_RS09105 (QR692_09105) | clpC | 1839601..1841847 (-) | 2247 | WP_019291613.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| QR692_RS09110 (QR692_09110) | rpoD | 1842065..1843189 (-) | 1125 | WP_306723678.1 | RNA polymerase sigma factor RpoD | - |
| QR692_RS12010 | - | 1843304..1843462 (-) | 159 | Protein_1796 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| QR692_RS09115 (QR692_09115) | dnaG | 1843483..1845369 (-) | 1887 | WP_017370525.1 | DNA primase | - |
Sequence
Protein
Download Length: 748 a.a. Molecular weight: 83343.32 Da Isoelectric Point: 4.7434
>NTDB_id=844768 QR692_RS09105 WP_019291613.1 1839601..1841847(-) (clpC) [Lactococcus petauri strain GB97]
MLCQNCKINEATIHLYTNVNGQRKQVDLCQNCYQIMKSGGQESLFAGATNISNNDDPFNPFPDIFQALHGNDQGRTMTPP
TQAGGRGPGGPQNPRGSQAPKGLLEEFGVNITDAARRGEIDPVIGRDSEITRVIEILNRRTKNNPVLIGEPGVGKTAVVE
GLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGVRGQFEERMQKLMEEIRKRDDVILFIDEIHEIVGAGSAGEGNMDAGN
ILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILRGIQKRYEDYHHVKYSDEAILAAANLSN
RYIQDRFLPDKAIDLLDEAGSKKNLTLKFVDPEDIKKRIEQAEAQKNEAMQREDFEKAAHFRDQIAKLRELQSHEISDTD
MPNITEKDIEAIVEEKTHIPVGDLKEKEQTQLINLAEDLKEHVIGQDEAIDKISKAVRRSRVGLGKPNRPIGSFLFVGPT
GVGKTELAKQLAYELFGSRDSMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVM
HMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDAIIEFSAL
SKENLLKIVDLMLDEVNAQIAQNDIHLDVTQAVKEKLVDLGYDPKMGARPLRRTIQDNIEDAIADFYIEHPEYKELLADL
VDDKIVIVNKPEEVKGTADTSDTEDEEK
MLCQNCKINEATIHLYTNVNGQRKQVDLCQNCYQIMKSGGQESLFAGATNISNNDDPFNPFPDIFQALHGNDQGRTMTPP
TQAGGRGPGGPQNPRGSQAPKGLLEEFGVNITDAARRGEIDPVIGRDSEITRVIEILNRRTKNNPVLIGEPGVGKTAVVE
GLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGVRGQFEERMQKLMEEIRKRDDVILFIDEIHEIVGAGSAGEGNMDAGN
ILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILRGIQKRYEDYHHVKYSDEAILAAANLSN
RYIQDRFLPDKAIDLLDEAGSKKNLTLKFVDPEDIKKRIEQAEAQKNEAMQREDFEKAAHFRDQIAKLRELQSHEISDTD
MPNITEKDIEAIVEEKTHIPVGDLKEKEQTQLINLAEDLKEHVIGQDEAIDKISKAVRRSRVGLGKPNRPIGSFLFVGPT
GVGKTELAKQLAYELFGSRDSMIRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTERVRRNPYSLILLDEIEKAHPDVM
HMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGKVEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDAIIEFSAL
SKENLLKIVDLMLDEVNAQIAQNDIHLDVTQAVKEKLVDLGYDPKMGARPLRRTIQDNIEDAIADFYIEHPEYKELLADL
VDDKIVIVNKPEEVKGTADTSDTEDEEK
Nucleotide
Download Length: 2247 bp
>NTDB_id=844768 QR692_RS09105 WP_019291613.1 1839601..1841847(-) (clpC) [Lactococcus petauri strain GB97]
ATGCTCTGCCAAAATTGTAAAATAAACGAAGCGACAATTCACCTTTATACAAATGTGAATGGCCAGCGTAAGCAAGTGGA
TTTATGCCAAAACTGTTATCAAATTATGAAATCAGGTGGTCAAGAAAGCTTGTTTGCTGGAGCTACAAATATTTCGAATA
ATGATGATCCTTTTAATCCATTTCCAGATATTTTCCAAGCCTTACATGGTAATGATCAAGGTCGGACAATGACACCTCCA
ACACAAGCGGGTGGTCGAGGCCCAGGAGGTCCACAAAATCCTCGTGGAAGTCAAGCACCTAAAGGACTTCTTGAAGAATT
CGGAGTCAACATTACTGATGCTGCACGTCGTGGAGAAATAGATCCTGTTATTGGACGGGATTCTGAAATTACCCGTGTTA
TCGAAATTTTGAATCGTCGAACAAAAAATAATCCTGTTCTTATCGGTGAACCTGGTGTTGGGAAAACAGCAGTTGTTGAA
GGTTTAGCCCAAAAAATAGTTGATGGTGATGTACCACAAAAACTACAAAATAAAGAAGTTATTCGTCTTGATGTTGTCAG
TCTCGTCCAAGGTACTGGTGTGCGTGGGCAATTTGAAGAGCGTATGCAAAAACTGATGGAAGAGATTCGTAAACGTGATG
ACGTTATCCTCTTCATTGATGAAATTCATGAGATTGTGGGCGCAGGCTCTGCTGGGGAAGGAAATATGGATGCTGGAAAT
ATCCTTAAACCGGCTTTAGCACGTGGAGAACTCCAACTTGTTGGAGCAACAACCCTCAATGAATATCGAATTATTGAAAA
AGATGCAGCGCTTGAGCGTCGGATGCAACCTGTTAAAGTTGATGAACCTTCTGTAGATGAGACTATCACAATCTTACGTG
GTATTCAAAAACGTTATGAAGATTATCATCATGTAAAATACTCAGATGAAGCAATCTTAGCTGCTGCAAATCTGTCTAAC
CGTTATATTCAGGACCGTTTCCTTCCCGATAAAGCAATAGACTTGCTGGACGAAGCGGGTTCGAAAAAGAATCTGACCCT
CAAATTTGTTGATCCTGAGGACATAAAGAAACGTATTGAGCAAGCAGAGGCGCAAAAAAACGAAGCCATGCAACGTGAAG
ATTTTGAGAAAGCAGCTCATTTCCGTGATCAAATCGCTAAGCTTCGTGAGCTTCAAAGCCATGAAATCTCAGATACTGAC
ATGCCAAATATCACAGAAAAAGATATTGAAGCAATTGTTGAAGAAAAGACACATATACCTGTAGGTGATTTGAAAGAAAA
AGAACAAACACAGCTCATTAATCTAGCTGAAGACTTGAAAGAACATGTTATCGGGCAAGATGAAGCGATTGATAAAATTT
CTAAAGCTGTGCGTCGTTCGCGTGTCGGACTTGGAAAGCCTAATCGTCCTATCGGTTCATTCCTCTTTGTTGGACCTACT
GGTGTAGGGAAGACCGAACTTGCAAAACAATTGGCTTATGAGCTTTTTGGCTCAAGAGATAGCATGATTCGCTTTGACAT
GTCGGAATACATGGAAAAACATAGTGTGGCTAAGTTGATTGGTGCTCCTCCAGGATATGTGGGTTATGAAGAAGCAGGTC
AGTTGACAGAACGTGTGCGCCGTAACCCATACAGCTTAATTTTATTGGATGAGATTGAGAAAGCTCACCCGGATGTAATG
CATATGTTCTTGCAAATTCTTGATGACGGGCGTTTGACAGATGCGCAAGGTCGTACAGTTTCCTTCAAAGATGCTATCAT
CATTATGACATCGAATGCTGGTACAGGTAAGGTTGAAGCAAGTGTTGGTTTTGGCGCTGCACGTGAAGGACGTACGAATT
CAGTGCTTGGAGAGTTGGGTAATTTCTTCAGTCCAGAATTCATGAACCGTTTTGATGCTATCATTGAATTCTCAGCATTG
AGCAAAGAAAACTTGCTTAAGATTGTAGATTTAATGTTGGATGAAGTAAATGCTCAAATCGCTCAAAATGATATTCATCT
TGACGTCACACAGGCGGTTAAAGAAAAACTCGTTGATCTGGGCTACGATCCGAAAATGGGAGCACGCCCATTACGTCGTA
CCATCCAGGATAATATCGAGGATGCTATTGCTGATTTTTATATCGAGCATCCTGAGTATAAAGAATTACTTGCAGATTTG
GTTGATGATAAGATTGTTATTGTGAATAAGCCTGAAGAAGTAAAAGGCACAGCGGATACATCTGATACTGAAGATGAGGA
GAAATAA
ATGCTCTGCCAAAATTGTAAAATAAACGAAGCGACAATTCACCTTTATACAAATGTGAATGGCCAGCGTAAGCAAGTGGA
TTTATGCCAAAACTGTTATCAAATTATGAAATCAGGTGGTCAAGAAAGCTTGTTTGCTGGAGCTACAAATATTTCGAATA
ATGATGATCCTTTTAATCCATTTCCAGATATTTTCCAAGCCTTACATGGTAATGATCAAGGTCGGACAATGACACCTCCA
ACACAAGCGGGTGGTCGAGGCCCAGGAGGTCCACAAAATCCTCGTGGAAGTCAAGCACCTAAAGGACTTCTTGAAGAATT
CGGAGTCAACATTACTGATGCTGCACGTCGTGGAGAAATAGATCCTGTTATTGGACGGGATTCTGAAATTACCCGTGTTA
TCGAAATTTTGAATCGTCGAACAAAAAATAATCCTGTTCTTATCGGTGAACCTGGTGTTGGGAAAACAGCAGTTGTTGAA
GGTTTAGCCCAAAAAATAGTTGATGGTGATGTACCACAAAAACTACAAAATAAAGAAGTTATTCGTCTTGATGTTGTCAG
TCTCGTCCAAGGTACTGGTGTGCGTGGGCAATTTGAAGAGCGTATGCAAAAACTGATGGAAGAGATTCGTAAACGTGATG
ACGTTATCCTCTTCATTGATGAAATTCATGAGATTGTGGGCGCAGGCTCTGCTGGGGAAGGAAATATGGATGCTGGAAAT
ATCCTTAAACCGGCTTTAGCACGTGGAGAACTCCAACTTGTTGGAGCAACAACCCTCAATGAATATCGAATTATTGAAAA
AGATGCAGCGCTTGAGCGTCGGATGCAACCTGTTAAAGTTGATGAACCTTCTGTAGATGAGACTATCACAATCTTACGTG
GTATTCAAAAACGTTATGAAGATTATCATCATGTAAAATACTCAGATGAAGCAATCTTAGCTGCTGCAAATCTGTCTAAC
CGTTATATTCAGGACCGTTTCCTTCCCGATAAAGCAATAGACTTGCTGGACGAAGCGGGTTCGAAAAAGAATCTGACCCT
CAAATTTGTTGATCCTGAGGACATAAAGAAACGTATTGAGCAAGCAGAGGCGCAAAAAAACGAAGCCATGCAACGTGAAG
ATTTTGAGAAAGCAGCTCATTTCCGTGATCAAATCGCTAAGCTTCGTGAGCTTCAAAGCCATGAAATCTCAGATACTGAC
ATGCCAAATATCACAGAAAAAGATATTGAAGCAATTGTTGAAGAAAAGACACATATACCTGTAGGTGATTTGAAAGAAAA
AGAACAAACACAGCTCATTAATCTAGCTGAAGACTTGAAAGAACATGTTATCGGGCAAGATGAAGCGATTGATAAAATTT
CTAAAGCTGTGCGTCGTTCGCGTGTCGGACTTGGAAAGCCTAATCGTCCTATCGGTTCATTCCTCTTTGTTGGACCTACT
GGTGTAGGGAAGACCGAACTTGCAAAACAATTGGCTTATGAGCTTTTTGGCTCAAGAGATAGCATGATTCGCTTTGACAT
GTCGGAATACATGGAAAAACATAGTGTGGCTAAGTTGATTGGTGCTCCTCCAGGATATGTGGGTTATGAAGAAGCAGGTC
AGTTGACAGAACGTGTGCGCCGTAACCCATACAGCTTAATTTTATTGGATGAGATTGAGAAAGCTCACCCGGATGTAATG
CATATGTTCTTGCAAATTCTTGATGACGGGCGTTTGACAGATGCGCAAGGTCGTACAGTTTCCTTCAAAGATGCTATCAT
CATTATGACATCGAATGCTGGTACAGGTAAGGTTGAAGCAAGTGTTGGTTTTGGCGCTGCACGTGAAGGACGTACGAATT
CAGTGCTTGGAGAGTTGGGTAATTTCTTCAGTCCAGAATTCATGAACCGTTTTGATGCTATCATTGAATTCTCAGCATTG
AGCAAAGAAAACTTGCTTAAGATTGTAGATTTAATGTTGGATGAAGTAAATGCTCAAATCGCTCAAAATGATATTCATCT
TGACGTCACACAGGCGGTTAAAGAAAAACTCGTTGATCTGGGCTACGATCCGAAAATGGGAGCACGCCCATTACGTCGTA
CCATCCAGGATAATATCGAGGATGCTATTGCTGATTTTTATATCGAGCATCCTGAGTATAAAGAATTACTTGCAGATTTG
GTTGATGATAAGATTGTTATTGTGAATAAGCCTGAAGAAGTAAAAGGCACAGCGGATACATCTGATACTGAAGATGAGGA
GAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
86.497 |
100 |
0.865 |
| clpE | Streptococcus mutans UA159 |
77.616 |
100 |
0.783 |
| clpE | Streptococcus pneumoniae TIGR4 |
77.702 |
97.727 |
0.759 |
| clpE | Streptococcus pneumoniae Rx1 |
77.702 |
97.727 |
0.759 |
| clpE | Streptococcus pneumoniae D39 |
77.702 |
97.727 |
0.759 |
| clpE | Streptococcus pneumoniae R6 |
77.702 |
97.727 |
0.759 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.1 |
85.963 |
0.448 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.798 |
81.952 |
0.392 |
| clpC | Streptococcus pneumoniae Rx1 |
46.935 |
82.888 |
0.389 |
| clpC | Streptococcus pneumoniae D39 |
46.935 |
82.888 |
0.389 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.774 |
82.888 |
0.388 |
| clpC | Streptococcus mutans UA159 |
46.602 |
82.62 |
0.385 |
| clpC | Streptococcus thermophilus LMD-9 |
45.645 |
82.888 |
0.378 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.484 |
82.888 |
0.377 |