Detailed information NTG0084467

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: L6410_RS02860
• Genome accession: NZ_AP024276
• Coordinates: 564621..565670 (+)
• Length: 349 a.a.
• NCBI ID: WP_237395890.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SUT-286
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 559621..570670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6410_RS02825 (SUT286_05220)	-	560346..561440 (+)	1095	WP_237395880.1	sensor histidine kinase	-
L6410_RS02830 (SUT286_05230)	-	561437..562036 (+)	600	WP_237395882.1	response regulator transcription factor	-
L6410_RS02835 (SUT286_05240)	-	562154..562375 (+)	222	WP_024396172.1	YqgQ family protein	-
L6410_RS02840 (SUT286_05250)	-	562372..562758 (+)	387	WP_024396173.1	rhodanese-like domain-containing protein	-
L6410_RS02845 (SUT286_05260)	-	562791..563528 (+)	738	WP_237395884.1	hypothetical protein	-
L6410_RS02850 (SUT286_05270)	rsmD	563617..564156 (+)	540	WP_237395886.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
L6410_RS02855 (SUT286_05280)	coaD	564146..564634 (+)	489	WP_237395888.1	pantetheine-phosphate adenylyltransferase	-
L6410_RS02860 (SUT286_05290)	sepM	564621..565670 (+)	1050	WP_237395890.1	SepM family pheromone-processing serine protease	Regulator
L6410_RS02865 (SUT286_05300)	-	565955..566608 (+)	654	WP_237395893.1	YutD family protein	-
L6410_RS02870 (SUT286_05310)	rlmN	566617..567729 (+)	1113	WP_024391183.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
L6410_RS02875 (SUT286_05320)	-	567726..568250 (+)	525	WP_237395895.1	VanZ family protein	-
L6410_RS02880	-	568435..570005 (+)	1571	WP_237395897.1	IS3 family transposase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37860.67 Da
• Isoelectric Point: 4.1516

>NTDB_id=84467 L6410_RS02860 WP_237395890.1 564621..565670(+) (sepM) [Streptococcus parasuis strain SUT-286]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDKEPGSYNFTYVSVLQATALQLLIAQFNP
YADIASAEEMTGGADSEEYYRIAQFYMETSQNMAKYQGLTLANKDVEMDFFGVYVLDLAEDSTFKNVLNIADTVVSINGK
TFESSQDLIKYVSGLELDSDVTVGYVSEGEEKTADGKIIKLSNGKNGIGITLVDHTEVKSSVPIDFQTGGIGGPSAGLMF
TLAIYTQLAEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKDPTAKTNYEEAKEA
AEKANADIEIVPVTTVQEAIDYLKSTKSE

Nucleotide

• Length: 1050 bp

>NTDB_id=84467 L6410_RS02860 WP_237395890.1 564621..565670(+) (sepM) [Streptococcus parasuis strain SUT-286]
ATGAAGAAAAATAAGAAATGGCTTTTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTATTTGTTCG
TCTACCATATTATATTGAAAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATAAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCT
TACGCAGATATTGCTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGGATTGCTCAATTTTACAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGTTTAACCTTGGCAAATAAGGATGTGGAGATGGATTTCTTCGGTGTTT
ACGTGTTGGACTTAGCAGAAGATTCTACATTTAAAAATGTTTTGAATATCGCTGATACGGTCGTTAGTATTAATGGAAAA
ACCTTTGAATCTTCTCAGGATCTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGAAGGAGAAGAAAAGACTGCCGACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGAATTGGTATCACGCTGGTGG
ACCATACTGAGGTAAAAAGTTCTGTCCCAATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACATTAGCTATTTATACACAGTTGGCAGAGCCAGACTTGCGTGATGGTCGTGTCATAGCTGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATTGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAAAAGGATCCAACGGCTAAAACAAACTACGAAGAAGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTGAAATCGTACCAGTGACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	61.85	99.14	0.613