Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QRS93_RS02915 Genome accession   NZ_CP127842
Coordinates   554450..555259 (+) Length   269 a.a.
NCBI ID   WP_003059746.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 549450..560259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRS93_RS02890 (QRS93_02890) - 549823..550524 (-) 702 WP_015016780.1 amino acid ABC transporter permease -
  QRS93_RS02895 (QRS93_02895) - 550538..551338 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  QRS93_RS02900 (QRS93_02900) - 551338..552132 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  QRS93_RS02905 (QRS93_02905) vicR 552391..553101 (+) 711 WP_012766682.1 response regulator YycF Regulator
  QRS93_RS02910 (QRS93_02910) vicK 553094..554446 (+) 1353 WP_014612101.1 cell wall metabolism sensor histidine kinase VicK Regulator
  QRS93_RS02915 (QRS93_02915) vicX 554450..555259 (+) 810 WP_003059746.1 MBL fold metallo-hydrolase Regulator
  QRS93_RS02920 (QRS93_02920) rnc 556017..556709 (+) 693 WP_003057240.1 ribonuclease III -
  QRS93_RS02925 (QRS93_02925) smc 556710..560255 (+) 3546 WP_015016783.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30157.38 Da        Isoelectric Point: 6.0739

>NTDB_id=844615 QRS93_RS02915 WP_003059746.1 554450..555259(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=844615 QRS93_RS02915 WP_003059746.1 554450..555259(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-F37]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766