Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QLQ02_RS20625 Genome accession   NZ_CP127833
Coordinates   3974221..3974685 (+) Length   154 a.a.
NCBI ID   WP_168747640.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3969221..3979685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS20605 fadH 3970407..3971171 (-) 765 WP_286058609.1 2,4-dienoyl-CoA reductase -
  QLQ02_RS20610 - 3971316..3972176 (+) 861 WP_229148098.1 metallophosphoesterase -
  QLQ02_RS20615 - 3972234..3972728 (+) 495 WP_229148179.1 L,D-transpeptidase family protein -
  QLQ02_RS20620 - 3972804..3974096 (+) 1293 WP_168747642.1 MFS transporter -
  QLQ02_RS20625 kre 3974221..3974685 (+) 465 WP_168747640.1 YkyB family protein Regulator
  QLQ02_RS20630 cheV 3974938..3975849 (-) 912 WP_168747638.1 chemotaxis protein CheV -
  QLQ02_RS20635 - 3976057..3976218 (+) 162 WP_229148095.1 hypothetical protein -
  QLQ02_RS20640 - 3976420..3977589 (+) 1170 WP_010334041.1 aminotransferase A -
  QLQ02_RS20645 kinA 3977613..3979433 (-) 1821 WP_168747635.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17840.63 Da        Isoelectric Point: 10.4212

>NTDB_id=844484 QLQ02_RS20625 WP_168747640.1 3974221..3974685(+) (kre) [Bacillus mojavensis strain KRS009]
MDDHAYSKDLQPTVDNLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQQYVGMKEKPLVANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=844484 QLQ02_RS20625 WP_168747640.1 3974221..3974685(+) (kre) [Bacillus mojavensis strain KRS009]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGATAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAACCCAAGGTTCAGCCAGCAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAACAATACGTCGGCATGAAAGAAAAGCCGCTTGTGG
CGAATCGCCAGCAGCCTGCATATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

97.403

100

0.974