Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QLQ02_RS20515 Genome accession   NZ_CP127833
Coordinates   3957836..3958420 (-) Length   194 a.a.
NCBI ID   WP_010334068.1    Uniprot ID   A0AAP3CRU9
Organism   Bacillus mojavensis strain KRS009     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3952836..3963420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS20490 mobB 3953234..3953755 (-) 522 WP_026014702.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QLQ02_RS20495 glp 3953716..3955008 (-) 1293 WP_010334072.1 gephyrin-like molybdotransferase Glp -
  QLQ02_RS20500 - 3955026..3956045 (-) 1020 WP_229148109.1 MoeB/ThiF family adenylyltransferase -
  QLQ02_RS20505 - 3956097..3956696 (-) 600 WP_286058601.1 molybdenum cofactor guanylyltransferase -
  QLQ02_RS20510 - 3956829..3957794 (+) 966 WP_010334069.1 hypothetical protein -
  QLQ02_RS20515 rok 3957836..3958420 (-) 585 WP_010334068.1 transcriptional regulator Rok Regulator
  QLQ02_RS20520 ykuV 3958871..3959329 (-) 459 WP_286058602.1 thiol-disulfide oxidoreductase YkuV -
  QLQ02_RS20525 ahpA 3959411..3959953 (-) 543 WP_286058603.1 biofilm-specific peroxidase AhpA -
  QLQ02_RS20530 - 3960198..3961001 (+) 804 WP_010334065.1 mechanosensitive ion channel family protein -
  QLQ02_RS20535 - 3961036..3961281 (-) 246 WP_010334064.1 YkuS family protein -
  QLQ02_RS20540 - 3961342..3962466 (-) 1125 WP_268505548.1 N-acetyldiaminopimelate deacetylase -
  QLQ02_RS20545 dapD 3962537..3963247 (-) 711 WP_010334062.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22131.11 Da        Isoelectric Point: 9.7169

>NTDB_id=844483 QLQ02_RS20515 WP_010334068.1 3957836..3958420(-) (rok) [Bacillus mojavensis strain KRS009]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQTISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESVESTESATE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=844483 QLQ02_RS20515 WP_010334068.1 3957836..3958420(-) (rok) [Bacillus mojavensis strain KRS009]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAAGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAAGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAAACTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACAAGAAGAAG
AAGAGGAACGGCAAGACCGGGGTCAAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGTTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTGGAAATTCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGCGAAATTGAATCCGTTGA
ATCAACTGAATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.709

97.423

0.923