Detailed information NTG0844438

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QLQ02_RS08965
• Genome accession: NZ_CP127833
• Coordinates: 1767076..1768221 (-)
• Length: 381 a.a.
• NCBI ID: WP_168749007.1
• Uniprot ID: -
• Organism: Bacillus mojavensis strain KRS009
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1762076..1773221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLQ02_RS08940	-	1762371..1762793 (+)	423	WP_286059345.1	hypothetical protein	-
QLQ02_RS08945	-	1762826..1764901 (-)	2076	WP_286059347.1	transglycosylase domain-containing protein	-
QLQ02_RS08950	speE	1765103..1765933 (+)	831	WP_168749008.1	spermidine synthase	-
QLQ02_RS08955	speB	1765994..1766866 (+)	873	WP_286059349.1	agmatinase	-
QLQ02_RS08960	-	1766973..1767092 (-)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QLQ02_RS08965	rapF	1767076..1768221 (-)	1146	WP_168749007.1	tetratricopeptide repeat protein	Regulator
QLQ02_RS08970	-	1768449..1769801 (+)	1353	WP_286059353.1	YncE family protein	-
QLQ02_RS08975	-	1769842..1771196 (+)	1355	Protein_1710	YncE family protein	-
QLQ02_RS08980	-	1771203..1771904 (-)	702	WP_286059355.1	bacteriocin biosynthesis protein AlbG	-
QLQ02_RS08985	-	1771901..1773178 (-)	1278	WP_286059357.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45697.34 Da
• Isoelectric Point: 4.9324

>NTDB_id=844438 QLQ02_RS08965 WP_168749007.1 1767076..1768221(-) (rapF) [Bacillus mojavensis strain KRS009]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELAQIEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLNFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAEQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGREYSIAAEDTVYLMEFEFLESLYLSGPDEEAI
EKCFVFLESKMMYADIEDFALDVAKYYHQKENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=844438 QLQ02_RS08965 WP_168749007.1 1767076..1768221(-) (rapF) [Bacillus mojavensis strain KRS009]
GTGACAAGTGTCATATCTTCTTCTTCCGTGGGAGAAAAGATTAATGAATGGTACATGTACATACGCCGATTCAGCATACC
GGATGCGGAATACTTACGAAGAGAAATCAAACAAGAGCTGGCCCAAATAGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAAAATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATTGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGACCGACGGGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGAATTTTG
TTAAAGATAAAATTGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTGTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAATGAACAAACTACATATGATATCAGAATGATTCAATGCCAGTCCCT
GTTTGGAGCTAACTTTTTGGACCTGAAACAGTATGATAAAGCAATTGCTCATTTCCAAAAAGCTTATACACTTGCTGAAG
CAGAACAGCAGCCGCAGCTAATGGGAAGAACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGCCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTTTTTGAAGAATCGAAAATGCTACCTTCACTGCCACAAGCCTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCTTGTGAATATCATAAAAAAGGAAGAGAATATTCAATAG
CTGCCGAAGACACTGTGTACTTAATGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGAAGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGAAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (193-213)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.79	100	0.798
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57