Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   QLQ02_RS00815 Genome accession   NZ_CP127833
Coordinates   130622..131773 (-) Length   383 a.a.
NCBI ID   WP_349817137.1    Uniprot ID   -
Organism   Bacillus mojavensis strain KRS009     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 125622..136773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ02_RS00790 - 125752..126483 (+) 732 WP_268504862.1 lytic transglycosylase domain-containing protein -
  QLQ02_RS00795 - 126750..127148 (+) 399 WP_010333756.1 thiol management oxidoreductase -
  QLQ02_RS00800 spxH 127145..128044 (+) 900 WP_010333755.1 protease adaptor protein SpxH -
  QLQ02_RS00805 - 128358..128525 (+) 168 WP_010333753.1 hypothetical protein -
  QLQ02_RS00810 pepF 128563..130392 (-) 1830 WP_010333752.1 oligoendopeptidase F -
  QLQ02_RS00815 coiA 130622..131773 (-) 1152 WP_349817137.1 competence protein CoiA family protein Machinery gene
  QLQ02_RS00820 mecA 131931..132587 (-) 657 WP_229147846.1 adaptor protein MecA Regulator
  QLQ02_RS00825 - 132569..132679 (-) 111 WP_128568472.1 hypothetical protein -
  QLQ02_RS00830 - 132867..133523 (+) 657 WP_168747421.1 TerC family protein -
  QLQ02_RS00835 spx 133566..133961 (-) 396 WP_010333748.1 transcriptional regulator Spx -
  QLQ02_RS00840 - 134140..134718 (-) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  QLQ02_RS00845 - 134885..136102 (-) 1218 WP_286059671.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44708.73 Da        Isoelectric Point: 9.9325

>NTDB_id=844408 QLQ02_RS00815 WP_349817137.1 130622..131773(-) (coiA) [Bacillus mojavensis strain KRS009]
MFSAVTEDGQVFHLIGRQSREKLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKTSPLLEPYVREIKQRPDILAKVKGNTLAVEYQCATLPPDVFQKRTAGFKQAGMIPRWILGGSRLKRTSSSFYQLSAF
HWQFINTSQNSDLLCYCPKTYSFLRLSHMIPFYTTHFYCSVQTIPVRQAAAEDLFFTESDSSFKHTDWTGAILRFRRKTH
RFLSKDINRLRLLFYEKRQTPLSFLPTEVFVPVQKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAILQHCKLHIHKK
NILLRGEYSDQGLSEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=844408 QLQ02_RS00815 WP_349817137.1 130622..131773(-) (coiA) [Bacillus mojavensis strain KRS009]
TTGTTTAGTGCTGTGACAGAAGACGGTCAAGTTTTTCACCTCATAGGCAGGCAGAGCAGAGAAAAATTAAAGCAGACCAG
GTTTTTTTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTATATGTATGGCTGAAA
ACGCAAAAGACTTCACCGCTCTTAGAGCCGTATGTCCGAGAGATTAAACAAAGGCCCGACATCTTGGCGAAAGTTAAGGG
AAATACGCTTGCTGTTGAATACCAATGCGCGACTCTCCCTCCTGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCGGTGGATTCTTGGGGGCAGCCGCTTAAAACGGACATCTTCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATACCAGTCAGAACAGCGATCTGTTATGTTACTGCCCCAAAACATATTCTTTCCTGAGGCTCAG
CCACATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAGTCCGTCAGGCAGCGGCAGAAGATC
TCTTTTTCACTGAATCGGATTCATCGTTTAAGCACACAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATAAATCGGCTTAGGCTTTTGTTTTATGAAAAACGGCAAACGCCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTACAGAAAGGAGCCGTTTTCAAGAGTCCCGTTTTTGTATGGCAGGGTTATCTTTATCTGTTTA
TTACGGATCTTGGGTATAAACATGCGCCCATTCGCTTTTCAGCCATTTTGCAGCACTGCAAACTACACATTCATAAAAAG
AACATTCTACTCAGAGGAGAATACAGCGATCAGGGTCTCAGTGAGGCTGTTAAACAGTACATTGAATTTTTGTGCAAGAA
GGGATTTTTAAGAGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.603

97.389

0.736