Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QRO24_RS02795 Genome accession   NZ_CP127829
Coordinates   596468..597421 (+) Length   317 a.a.
NCBI ID   WP_196247096.1    Uniprot ID   -
Organism   Gallibacterium anatis strain OH/Ck/12965/20     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 591468..602421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRO24_RS02770 (QRO24_02760) - 591955..592896 (+) 942 WP_013745084.1 ABC transporter ATP-binding protein -
  QRO24_RS02775 (QRO24_02765) - 592897..593667 (+) 771 WP_407902869.1 ABC transporter permease -
  QRO24_RS02780 (QRO24_02770) modB 593693..594409 (+) 717 WP_013745082.1 molybdate ABC transporter permease subunit -
  QRO24_RS02785 (QRO24_02775) modC 594402..595457 (+) 1056 WP_094873547.1 molybdenum ABC transporter ATP-binding protein -
  QRO24_RS02790 (QRO24_02780) modA 595502..596260 (+) 759 WP_021462204.1 molybdate ABC transporter substrate-binding protein -
  QRO24_RS02795 (QRO24_02785) ceuB 596468..597421 (+) 954 WP_196247096.1 ABC transporter permease Machinery gene
  QRO24_RS02800 (QRO24_02790) - 597414..598370 (+) 957 WP_409026262.1 iron chelate uptake ABC transporter family permease subunit -
  QRO24_RS02805 (QRO24_02795) - 598370..599131 (+) 762 WP_018345865.1 ABC transporter ATP-binding protein -
  QRO24_RS02810 (QRO24_02800) - 599162..600070 (+) 909 WP_018345864.1 siderophore ABC transporter substrate-binding protein -
  QRO24_RS02815 (QRO24_02805) - 600185..602107 (+) 1923 WP_039153509.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34688.73 Da        Isoelectric Point: 8.9889

>NTDB_id=844369 QRO24_RS02795 WP_196247096.1 596468..597421(+) (ceuB) [Gallibacterium anatis strain OH/Ck/12965/20]
MIQRRYLLLLLAVLSITSLLIGVSSVSISGLLQFDAEQWQILLISRIPRLVSILIAGAGLSICGLIMQQLSRNRFVSPTT
AGTMDCARLGVLLAILCFPDASMLLKSAIAIIAAFAGSLLFMTLLSKLKFTDVIFVPLVGIMFGNIISSMTAFIAYQQDL
LQNLSAWLQGDFSLIMSGRYEMLYISIPTLLFAYLYAQRFSIVGMGEEFATNLGLNYKQVLYLGLAIVSIVSAIVIVTVG
VIPFLGLIIPNIVALYLGDNLRNTLSHTALLGAIFVLFCDILGRIVIYPYEISINAVVGVFGSAIFLYLLFKRYRNA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=844369 QRO24_RS02795 WP_196247096.1 596468..597421(+) (ceuB) [Gallibacterium anatis strain OH/Ck/12965/20]
ATGATTCAACGACGATATCTGTTGTTATTATTGGCAGTATTATCAATTACTTCTTTATTAATCGGTGTGAGTTCCGTCTC
TATTAGCGGTCTACTACAATTTGATGCCGAACAATGGCAAATTTTATTGATCAGCCGTATTCCTCGTTTAGTGAGCATTT
TGATTGCCGGTGCCGGTTTAAGTATTTGTGGCTTAATTATGCAACAACTTAGTCGTAATCGCTTTGTTTCACCAACCACC
GCCGGAACGATGGATTGTGCGCGATTAGGTGTGTTATTAGCTATTCTTTGCTTTCCTGATGCTTCAATGTTATTAAAATC
AGCTATTGCAATTATTGCCGCATTTGCCGGCTCATTATTATTTATGACTTTATTGTCAAAACTAAAATTTACCGATGTTA
TTTTTGTGCCGCTAGTTGGCATTATGTTTGGCAATATTATTAGTTCTATGACCGCTTTTATCGCCTATCAACAAGATTTA
TTACAAAATTTATCTGCTTGGTTGCAAGGTGATTTTTCGCTAATTATGAGTGGACGCTATGAGATGCTTTATATCAGCAT
CCCAACATTATTATTTGCATATCTTTATGCGCAACGTTTTTCTATTGTCGGGATGGGAGAAGAATTTGCCACCAACTTAG
GATTAAATTATAAGCAGGTACTTTATTTAGGATTAGCCATTGTTTCGATTGTGTCCGCCATTGTTATTGTTACCGTAGGC
GTTATTCCTTTTTTAGGATTAATTATCCCAAATATTGTCGCTTTATATTTAGGAGATAATTTACGTAATACTTTGTCGCA
TACAGCATTATTAGGTGCTATTTTTGTATTATTTTGCGATATTCTTGGACGCATTGTGATTTATCCTTATGAAATTTCGA
TTAATGCCGTAGTTGGCGTTTTTGGTAGTGCTATTTTCCTCTATTTATTATTTAAAAGGTATCGTAATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.074

97.476

0.517