Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   sa230627_RS09045 Genome accession   NZ_CP143800
Coordinates   1864323..1865063 (-) Length   246 a.a.
NCBI ID   WP_000216870.1    Uniprot ID   -
Organism   Staphylococcus aureus strain sa230627barcode06     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1859323..1870063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  sa230627_RS09020 (sa230627_1724) hemH 1860199..1861122 (-) 924 WP_000162885.1 ferrochelatase -
  sa230627_RS09025 (sa230627_1725) hemE 1861180..1862217 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  sa230627_RS09030 - 1862207..1862317 (-) 111 WP_001790154.1 hypothetical protein -
  sa230627_RS09035 (sa230627_1726) traP 1862480..1862983 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  sa230627_RS09040 (sa230627_1727) - 1863107..1864330 (-) 1224 WP_001245768.1 ABC transporter permease -
  sa230627_RS09045 (sa230627_1728) pptA 1864323..1865063 (-) 741 WP_000216870.1 ABC transporter ATP-binding protein Regulator
  sa230627_RS09050 (sa230627_1729) - 1865197..1865619 (+) 423 WP_000004981.1 HIT family protein -
  sa230627_RS09055 (sa230627_1730) - 1865761..1866126 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  sa230627_RS09060 (sa230627_1731) - 1866859..1867416 (+) 558 WP_000477963.1 DUF3267 domain-containing protein -
  sa230627_RS09065 (sa230627_1732) - 1867621..1868583 (+) 963 WP_000782121.1 foldase protein PrsA -
  sa230627_RS09070 (sa230627_1733) yhaM 1868704..1869645 (-) 942 WP_001244180.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27658.96 Da        Isoelectric Point: 4.6672

>NTDB_id=844343 sa230627_RS09045 WP_000216870.1 1864323..1865063(-) (pptA) [Staphylococcus aureus strain sa230627barcode06]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKAMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=844343 sa230627_RS09045 WP_000216870.1 1864323..1865063(-) (pptA) [Staphylococcus aureus strain sa230627barcode06]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGCCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

97.154

0.553
  pptA Streptococcus thermophilus LMD-9

55.649

97.154

0.541