Detailed information NTG0084433

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JMH49_RS02290
• Genome accession: NZ_AP024270
• Coordinates: 420260..421174 (-)
• Length: 304 a.a.
• NCBI ID: WP_011227933.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HB5018
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 415260..426174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMH49_RS02260 (TthHB5018_04380)	hisH	415890..416486 (+)	597	WP_024119973.1	imidazole glycerol phosphate synthase subunit HisH	-
JMH49_RS02265 (TthHB5018_04390)	-	416457..417377 (-)	921	WP_011227930.1	carbohydrate kinase family protein	-
JMH49_RS02270 (TthHB5018_04400)	guaB	417522..419003 (+)	1482	WP_011227931.1	IMP dehydrogenase	-
JMH49_RS02275 (TthHB5018_04410)	-	419000..419230 (-)	231	WP_011172522.1	hypothetical protein	-
JMH49_RS02280 (TthHB5018_04420)	-	419271..419756 (+)	486	WP_011227932.1	hypothetical protein	-
JMH49_RS02285 (TthHB5018_04430)	-	419701..420126 (-)	426	WP_011172524.1	disulfide bond formation protein B	-
JMH49_RS02290 (TthHB5018_04440)	pilA	420260..421174 (-)	915	WP_011227933.1	signal recognition particle-docking protein FtsY	Machinery gene
JMH49_RS02295 (TthHB5018_04450)	-	421174..421614 (-)	441	WP_011227934.1	hypothetical protein	-
JMH49_RS02300 (TthHB5018_04460)	gltX	421631..423037 (-)	1407	WP_201351160.1	glutamate--tRNA ligase	-
JMH49_RS02305 (TthHB5018_04470)	lptB	423092..423820 (+)	729	WP_201351161.1	LPS export ABC transporter ATP-binding protein	-
JMH49_RS13385 (TthHB5018_04480)	-	423823..425166 (+)	1344	WP_259329996.1	DUF3084 domain-containing protein	-
JMH49_RS13390	prmC	425068..425961 (-)	894	Protein_443	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32721.17 Da
• Isoelectric Point: 9.7124

>NTDB_id=84433 JMH49_RS02290 WP_011227933.1 420260..421174(-) (pilA) [Thermus thermophilus strain HB5018]
MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE
RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV
IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=84433 JMH49_RS02290 WP_011227933.1 420260..421174(-) (pilA) [Thermus thermophilus strain HB5018]
ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA
CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA
AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG
CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT
GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC
TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTTGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG
ATCCAGGGCCCGGAAGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT
CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG
CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAAAACGGCCTGGAGCAGGCC
AAGCGCTTTCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT
CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG
CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-65)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.726	100	0.503