Detailed information NTG0843804

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QRY57_RS25375
• Genome accession: NZ_CP127376
• Coordinates: 4584194..4585540 (-)
• Length: 448 a.a.
• NCBI ID: WP_286016413.1
• Uniprot ID: -
• Organism: Bacillus arachidis strain YX15
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4579194..4590540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRY57_RS25355 (QRY57_25360)	secA	4579377..4581887 (-)	2511	WP_286016412.1	preprotein translocase subunit SecA	-
QRY57_RS25360 (QRY57_25365)	raiA	4582230..4582772 (-)	543	WP_026594041.1	ribosome-associated translation inhibitor RaiA	-
QRY57_RS25365 (QRY57_25370)	cspC	4583166..4583363 (-)	198	WP_026594040.1	cold shock protein CspC	-
QRY57_RS25370 (QRY57_25375)	-	4583490..4584194 (-)	705	WP_090693807.1	ComF family protein	-
QRY57_RS25375 (QRY57_25380)	comFA	4584194..4585540 (-)	1347	WP_286016413.1	DEAD/DEAH box helicase	Machinery gene
QRY57_RS25380 (QRY57_25385)	-	4585668..4587180 (-)	1513	Protein_4610	NlpC/P60 family protein	-
QRY57_RS25385 (QRY57_25390)	-	4587246..4587560 (-)	315	WP_016112543.1	helix-turn-helix domain-containing protein	-
QRY57_RS25390 (QRY57_25395)	-	4587730..4588572 (-)	843	WP_286016414.1	DegV family protein	-
QRY57_RS25395 (QRY57_25400)	-	4588813..4589454 (+)	642	WP_286016415.1	YigZ family protein	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51488.95 Da
• Isoelectric Point: 9.8306

>NTDB_id=843804 QRY57_RS25375 WP_286016413.1 4584194..4585540(-) (comFA) [Bacillus arachidis strain YX15]
MLAGRQVLLEELSFSKDELDHLERQGDISLERGVIKKSLRYVCQRCGNMEGRLFASFLCKRCNQMCTYCRKCITMGRVGE
CTVLVRGIRDVEWEVLPNSLRWEGQLSPGQERAANGVTEAVRQKESFFIWAVCGAGKTEMLFYGIEEALQKGKRVCIATP
RTDVVLELAPRLQTVFPDVPIAALYGGSLDREKEARLLVSTTHQLLRYYKAFDVMIVDEIDAFPYAVDKMLHYAVERASK
DRAAKIYLTATPSETWKRKLWSGKQKGVIIPGRYHRHPLPVPRFRWCGNWKKALNRKEIPFVVFEWLKYHLLKQSPIFLF
VPHVRYIDEVSILLKTLDNRIEGVHAEDPNRKEKVTAFRKRNIPLLVTTTILERGVTIENLQVAVLGAEEPIFSESALVQ
IAGRAGRSHRRPDGDIFYFHCGKTEAMIRARRHIQSMNKRAKREGLID

Nucleotide

• Length: 1347 bp

>NTDB_id=843804 QRY57_RS25375 WP_286016413.1 4584194..4585540(-) (comFA) [Bacillus arachidis strain YX15]
ATGCTAGCAGGAAGACAAGTGCTGTTAGAAGAACTTTCATTTTCAAAGGATGAATTAGATCATTTGGAAAGACAAGGGGA
TATTTCTTTGGAAAGAGGTGTCATAAAGAAATCTTTACGCTATGTATGCCAGCGCTGTGGAAATATGGAAGGGCGGTTAT
TCGCTTCGTTTTTATGTAAGCGATGCAATCAAATGTGCACGTATTGCCGAAAGTGCATTACGATGGGACGAGTGGGAGAA
TGTACAGTGCTCGTTAGAGGTATACGGGATGTAGAATGGGAAGTTTTGCCGAATTCTTTACGATGGGAGGGGCAATTATC
ACCTGGACAGGAAAGAGCAGCTAACGGAGTAACAGAAGCAGTACGCCAAAAAGAATCTTTTTTTATATGGGCAGTATGCG
GAGCTGGTAAGACGGAGATGCTTTTTTATGGTATAGAAGAGGCACTACAAAAAGGAAAGCGGGTTTGTATTGCAACGCCG
CGGACCGATGTTGTGTTAGAGCTGGCTCCTCGTTTACAAACTGTTTTTCCAGATGTACCGATTGCTGCACTATATGGTGG
TAGTTTGGATCGTGAAAAGGAAGCGAGACTTCTCGTTTCTACAACACATCAGTTACTTCGGTATTACAAGGCCTTCGATG
TTATGATTGTCGATGAAATTGATGCCTTTCCATATGCAGTGGACAAGATGCTTCATTATGCGGTGGAGCGAGCAAGTAAA
GATAGGGCAGCAAAAATTTATTTAACGGCGACCCCGTCAGAAACATGGAAACGTAAGTTATGGAGTGGGAAACAAAAAGG
TGTGATTATTCCAGGACGTTATCATCGACATCCTTTGCCAGTCCCAAGATTCAGGTGGTGTGGCAATTGGAAAAAGGCAC
TAAATCGAAAAGAAATCCCATTTGTTGTTTTTGAATGGTTAAAGTATCACCTCCTCAAGCAATCTCCTATTTTTCTATTT
GTTCCCCACGTACGTTATATTGATGAAGTAAGTATATTGTTAAAAACACTAGATAATCGAATTGAAGGCGTTCATGCGGA
GGATCCAAATCGAAAAGAAAAGGTGACAGCGTTTCGAAAAAGAAATATTCCACTATTAGTAACGACAACGATTTTGGAGC
GCGGCGTGACGATAGAGAATTTGCAAGTAGCGGTGTTAGGAGCGGAAGAACCTATTTTCTCGGAAAGTGCACTTGTACAA
ATTGCTGGTAGGGCCGGTAGAAGTCATCGTAGGCCAGATGGTGATATCTTTTATTTTCATTGTGGTAAAACAGAAGCAAT
GATACGAGCGAGAAGACATATTCAATCTATGAATAAAAGAGCAAAGCGAGAAGGGTTGATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (105-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.357	98.661	0.507
comFA	Latilactobacillus sakei subsp. sakei 23K	42.857	89.063	0.382